Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx3P50481 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx3P50481 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.08□□□□□ -0.32
Lhx3P50481 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Lhx3P50481 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx3P50481 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx3P50481 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.08□□□□□ -0.32
Lhx3P50481 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Lhx3P50481 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Lhx3P50481 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx3P50481 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx3P50481 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.08□□□□□ -0.32
Lhx3P50481 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx3P50481 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Lhx3P50481 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.07□□□□□ -0.32
Lhx3P50481 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.07□□□□□ -0.32
Lhx3P50481 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx3P50481 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx3P50481 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx3P50481 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx3P50481 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Lhx3P50481 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Lhx3P50481 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Lhx3P50481 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx3P50481 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx3P50481 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx3P50481 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.07□□□□□ -0.32
Lhx3P50481 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Lhx3P50481 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx3P50481 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx3P50481 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.07□□□□□ -0.32
Lhx3P50481 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.07□□□□□ -0.32
Lhx3P50481 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.07□□□□□ -0.32
Lhx3P50481 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.07□□□□□ -0.32
Lhx3P50481 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx3P50481 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Lhx3P50481 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx3P50481 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx3P50481 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx3P50481 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx3P50481 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx3P50481 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx3P50481 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx3P50481 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx3P50481 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx3P50481 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx3P50481 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx3P50481 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.07□□□□□ -0.32
Lhx3P50481 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx3P50481 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx3P50481 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Lhx3P50481 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx3P50481 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx3P50481 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.07□□□□□ -0.32
Lhx3P50481 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx3P50481 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx3P50481 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx3P50481 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx3P50481 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Lhx3P50481 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Lhx3P50481 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx3P50481 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx3P50481 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx3P50481 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx3P50481 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.06□□□□□ -0.32
Lhx3P50481 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx3P50481 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.06□□□□□ -0.32
Lhx3P50481 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx3P50481 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx3P50481 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Lhx3P50481 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx3P50481 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx3P50481 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx3P50481 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx3P50481 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx3P50481 Gm13492-201ENSMUST00000119772 665 ntBASIC13.06□□□□□ -0.32
Lhx3P50481 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
Lhx3P50481 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.06□□□□□ -0.32
Lhx3P50481 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.06□□□□□ -0.32
Lhx3P50481 Gm42627-201ENSMUST00000197347 224 ntBASIC13.06□□□□□ -0.32
Lhx3P50481 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.06□□□□□ -0.32
Lhx3P50481 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.06□□□□□ -0.32
Lhx3P50481 Gm45930-201ENSMUST00000221330 292 ntBASIC13.06□□□□□ -0.32
Lhx3P50481 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.06□□□□□ -0.32
Lhx3P50481 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx3P50481 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Lhx3P50481 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Lhx3P50481 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Lhx3P50481 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx3P50481 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.06□□□□□ -0.32
Lhx3P50481 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx3P50481 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx3P50481 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Lhx3P50481 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx3P50481 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx3P50481 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx3P50481 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Lhx3P50481 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Lhx3P50481 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx3P50481 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms