Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Xcl1P47993 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Xcl1P47993 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Xcl1P47993 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
Xcl1P47993 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Xcl1P47993 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC8.31□□□□□ -1.08
Xcl1P47993 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC8.31□□□□□ -1.08
Xcl1P47993 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Xcl1P47993 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC8.31□□□□□ -1.08
Xcl1P47993 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Xcl1P47993 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Gm22697-201ENSMUST00000175194 63 ntBASIC8.31□□□□□ -1.08
Xcl1P47993 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
Xcl1P47993 Gm37153-201ENSMUST00000193637 231 ntBASIC8.31□□□□□ -1.08
Xcl1P47993 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 AC138604.1-201ENSMUST00000226969 739 ntBASIC8.31□□□□□ -1.08
Xcl1P47993 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
Xcl1P47993 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Spr-ps1-201ENSMUST00000089584 605 ntBASIC8.31□□□□□ -1.08
Xcl1P47993 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC8.31□□□□□ -1.08
Xcl1P47993 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC8.31□□□□□ -1.08
Xcl1P47993 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC8.31□□□□□ -1.08
Xcl1P47993 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Xcl1P47993 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Xcl1P47993 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Xcl1P47993 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Xcl1P47993 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Xcl1P47993 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Xcl1P47993 Gm45677-201ENSMUST00000209975 1341 ntBASIC8.3□□□□□ -1.08
Xcl1P47993 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Xcl1P47993 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Xcl1P47993 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Xcl1P47993 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Xcl1P47993 Gm45496-201ENSMUST00000209918 2917 ntBASIC8.3□□□□□ -1.08
Xcl1P47993 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC8.3□□□□□ -1.08
Xcl1P47993 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Xcl1P47993 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Xcl1P47993 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Xcl1P47993 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Xcl1P47993 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Xcl1P47993 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Xcl1P47993 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Xcl1P47993 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC8.3□□□□□ -1.08
Xcl1P47993 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Xcl1P47993 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC8.3□□□□□ -1.08
Xcl1P47993 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Xcl1P47993 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC8.3□□□□□ -1.08
Xcl1P47993 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Xcl1P47993 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Xcl1P47993 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Xcl1P47993 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Xcl1P47993 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC8.3□□□□□ -1.08
Xcl1P47993 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Xcl1P47993 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Xcl1P47993 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Xcl1P47993 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Xcl1P47993 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Xcl1P47993 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Xcl1P47993 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Xcl1P47993 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Xcl1P47993 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Xcl1P47993 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms