Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.64□□□□□ -0.39
Gli1P47806 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gli1P47806 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Gli1P47806 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.64□□□□□ -0.39
Gli1P47806 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gli1P47806 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.64□□□□□ -0.39
Gli1P47806 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Gli1P47806 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gli1P47806 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.64□□□□□ -0.39
Gli1P47806 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.64□□□□□ -0.39
Gli1P47806 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gli1P47806 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gli1P47806 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gli1P47806 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gli1P47806 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gli1P47806 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gli1P47806 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Gli1P47806 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gli1P47806 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.64□□□□□ -0.39
Gli1P47806 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.64□□□□□ -0.39
Gli1P47806 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gli1P47806 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gli1P47806 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gli1P47806 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.64□□□□□ -0.39
Gli1P47806 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Gli1P47806 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gli1P47806 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Gli1P47806 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gli1P47806 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Gli1P47806 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gli1P47806 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gli1P47806 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.63□□□□□ -0.39
Gli1P47806 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.63□□□□□ -0.39
Gli1P47806 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.63□□□□□ -0.39
Gli1P47806 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gli1P47806 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.63□□□□□ -0.39
Gli1P47806 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gli1P47806 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gli1P47806 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Gli1P47806 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gli1P47806 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gli1P47806 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gli1P47806 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gli1P47806 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gli1P47806 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gli1P47806 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gli1P47806 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gli1P47806 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Gli1P47806 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Gli1P47806 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.63□□□□□ -0.39
Gli1P47806 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gli1P47806 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.63□□□□□ -0.39
Gli1P47806 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gli1P47806 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gli1P47806 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.63□□□□□ -0.39
Gli1P47806 Gm45331-201ENSMUST00000209868 554 ntBASIC12.63□□□□□ -0.39
Gli1P47806 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Gli1P47806 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gli1P47806 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.63□□□□□ -0.39
Gli1P47806 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gli1P47806 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.63□□□□□ -0.39
Gli1P47806 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gli1P47806 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gli1P47806 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gli1P47806 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gli1P47806 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gli1P47806 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.63□□□□□ -0.39
Gli1P47806 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gli1P47806 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Gli1P47806 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.62□□□□□ -0.39
Gli1P47806 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Gli1P47806 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.62□□□□□ -0.39
Gli1P47806 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gli1P47806 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.62□□□□□ -0.39
Gli1P47806 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Gli1P47806 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gli1P47806 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gli1P47806 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Gli1P47806 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gli1P47806 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gli1P47806 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gli1P47806 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gli1P47806 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.62□□□□□ -0.39
Gli1P47806 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gli1P47806 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.62□□□□□ -0.39
Gli1P47806 Gm27486-201ENSMUST00000184923 80 ntBASIC12.62□□□□□ -0.39
Gli1P47806 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.62□□□□□ -0.39
Gli1P47806 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.62□□□□□ -0.39
Gli1P47806 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.62□□□□□ -0.39
Gli1P47806 Gm5425-201ENSMUST00000214125 459 ntBASIC12.62□□□□□ -0.39
Gli1P47806 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.62□□□□□ -0.39
Gli1P47806 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gli1P47806 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gli1P47806 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gli1P47806 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gli1P47806 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gli1P47806 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gli1P47806 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gli1P47806 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gli1P47806 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms