Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Nkx2-2P42586 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Nkx2-2P42586 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.84□□□□□ -0.51
Nkx2-2P42586 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.84□□□□□ -0.51
Nkx2-2P42586 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.84□□□□□ -0.51
Nkx2-2P42586 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Nkx2-2P42586 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Gm5745-201ENSMUST00000183748 313 ntBASIC11.84□□□□□ -0.51
Nkx2-2P42586 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.84□□□□□ -0.51
Nkx2-2P42586 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.84□□□□□ -0.51
Nkx2-2P42586 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-2P42586 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Nkx2-2P42586 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-2P42586 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.83□□□□□ -0.52
Nkx2-2P42586 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Gm27682-201ENSMUST00000183930 110 ntBASIC11.83□□□□□ -0.52
Nkx2-2P42586 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Gm43818-201ENSMUST00000200605 466 ntBASIC11.83□□□□□ -0.52
Nkx2-2P42586 Gm32025-201ENSMUST00000217960 307 ntBASIC11.83□□□□□ -0.52
Nkx2-2P42586 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.83□□□□□ -0.52
Nkx2-2P42586 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.83□□□□□ -0.52
Nkx2-2P42586 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nkx2-2P42586 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.82□□□□□ -0.52
Nkx2-2P42586 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms