Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh4P39038 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh4P39038 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh4P39038 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh4P39038 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh4P39038 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Cdh4P39038 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cdh4P39038 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cdh4P39038 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cdh4P39038 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 Gm14660-201ENSMUST00000119809 575 ntBASIC12.39□□□□□ -0.43
Cdh4P39038 Gm1335-201ENSMUST00000121653 386 ntBASIC12.39□□□□□ -0.43
Cdh4P39038 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdh4P39038 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdh4P39038 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 Gm26185-201ENSMUST00000157692 266 ntBASIC12.39□□□□□ -0.43
Cdh4P39038 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.39□□□□□ -0.43
Cdh4P39038 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.39□□□□□ -0.43
Cdh4P39038 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cdh4P39038 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.39□□□□□ -0.43
Cdh4P39038 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cdh4P39038 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Cdh4P39038 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cdh4P39038 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdh4P39038 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cdh4P39038 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh4P39038 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.38□□□□□ -0.43
Cdh4P39038 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Cdh4P39038 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cdh4P39038 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
Cdh4P39038 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.38□□□□□ -0.43
Cdh4P39038 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Cdh4P39038 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.38□□□□□ -0.43
Cdh4P39038 Gm26927-201ENSMUST00000182385 965 ntBASIC12.38□□□□□ -0.43
Cdh4P39038 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cdh4P39038 Gm10268-201ENSMUST00000085340 555 ntBASIC12.38□□□□□ -0.43
Cdh4P39038 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
Cdh4P39038 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Cdh4P39038 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Cdh4P39038 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh4P39038 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh4P39038 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.37□□□□□ -0.43
Cdh4P39038 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh4P39038 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cdh4P39038 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh4P39038 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms