Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LdlrP35951 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
LdlrP35951 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LdlrP35951 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LdlrP35951 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.88□□□□□ -0.35
LdlrP35951 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LdlrP35951 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LdlrP35951 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.88□□□□□ -0.35
LdlrP35951 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LdlrP35951 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
LdlrP35951 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.87□□□□□ -0.35
LdlrP35951 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.87□□□□□ -0.35
LdlrP35951 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
LdlrP35951 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
LdlrP35951 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.87□□□□□ -0.35
LdlrP35951 Gm12957-201ENSMUST00000117835 377 ntBASIC12.87□□□□□ -0.35
LdlrP35951 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.87□□□□□ -0.35
LdlrP35951 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
LdlrP35951 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.87□□□□□ -0.35
LdlrP35951 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.87□□□□□ -0.35
LdlrP35951 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
LdlrP35951 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.87□□□□□ -0.35
LdlrP35951 Gm17794-201ENSMUST00000220252 955 ntBASIC12.87□□□□□ -0.35
LdlrP35951 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.87□□□□□ -0.35
LdlrP35951 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.87□□□□□ -0.35
LdlrP35951 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
LdlrP35951 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
LdlrP35951 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
LdlrP35951 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LdlrP35951 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.87□□□□□ -0.35
LdlrP35951 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LdlrP35951 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LdlrP35951 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LdlrP35951 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LdlrP35951 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LdlrP35951 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LdlrP35951 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LdlrP35951 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LdlrP35951 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LdlrP35951 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LdlrP35951 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LdlrP35951 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LdlrP35951 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LdlrP35951 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
LdlrP35951 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LdlrP35951 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.86□□□□□ -0.35
LdlrP35951 Mir1894-201ENSMUST00000122802 81 ntBASIC12.86□□□□□ -0.35
LdlrP35951 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LdlrP35951 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.86□□□□□ -0.35
LdlrP35951 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
LdlrP35951 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
LdlrP35951 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
LdlrP35951 Gm6244-201ENSMUST00000178732 841 ntBASIC12.86□□□□□ -0.35
LdlrP35951 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LdlrP35951 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.86□□□□□ -0.35
LdlrP35951 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.86□□□□□ -0.35
LdlrP35951 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LdlrP35951 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LdlrP35951 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
LdlrP35951 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LdlrP35951 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
LdlrP35951 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LdlrP35951 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LdlrP35951 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LdlrP35951 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LdlrP35951 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.86□□□□□ -0.35
LdlrP35951 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LdlrP35951 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LdlrP35951 Pck2-205ENSMUST00000226352 2784 ntBASIC12.86□□□□□ -0.35
LdlrP35951 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.86□□□□□ -0.35
LdlrP35951 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.86□□□□□ -0.35
LdlrP35951 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LdlrP35951 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LdlrP35951 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LdlrP35951 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms