Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Thbs1P35441 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thbs1P35441 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Thbs1P35441 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Thbs1P35441 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Thbs1P35441 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12□□□□□ -0.49
Thbs1P35441 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Thbs1P35441 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.99□□□□□ -0.49
Thbs1P35441 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Thbs1P35441 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Thbs1P35441 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Thbs1P35441 Gm15806-201ENSMUST00000120696 955 ntBASIC11.99□□□□□ -0.49
Thbs1P35441 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.99□□□□□ -0.49
Thbs1P35441 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.99□□□□□ -0.49
Thbs1P35441 Gm18351-201ENSMUST00000188646 883 ntBASIC11.99□□□□□ -0.49
Thbs1P35441 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.99□□□□□ -0.49
Thbs1P35441 Gm37436-201ENSMUST00000193842 1085 ntBASIC11.99□□□□□ -0.49
Thbs1P35441 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.99□□□□□ -0.49
Thbs1P35441 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.99□□□□□ -0.49
Thbs1P35441 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.99□□□□□ -0.49
Thbs1P35441 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.99□□□□□ -0.49
Thbs1P35441 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.99□□□□□ -0.49
Thbs1P35441 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.99□□□□□ -0.49
Thbs1P35441 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.99□□□□□ -0.49
Thbs1P35441 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.99□□□□□ -0.49
Thbs1P35441 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.99□□□□□ -0.49
Thbs1P35441 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Thbs1P35441 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Thbs1P35441 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Thbs1P35441 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Thbs1P35441 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Thbs1P35441 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Thbs1P35441 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Thbs1P35441 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.98□□□□□ -0.49
Thbs1P35441 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.98□□□□□ -0.49
Thbs1P35441 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Thbs1P35441 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Thbs1P35441 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.98□□□□□ -0.49
Thbs1P35441 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.98□□□□□ -0.49
Thbs1P35441 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.98□□□□□ -0.49
Thbs1P35441 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.98□□□□□ -0.49
Thbs1P35441 AC106830.1-201ENSMUST00000228032 1003 ntBASIC11.98□□□□□ -0.49
Thbs1P35441 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Thbs1P35441 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Thbs1P35441 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Thbs1P35441 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Thbs1P35441 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Thbs1P35441 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms