Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.29□□□□□ -0.28
Nfkb1P25799 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Nfkb1P25799 Gm27243-201ENSMUST00000183964 521 ntBASIC13.29□□□□□ -0.28
Nfkb1P25799 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.29□□□□□ -0.28
Nfkb1P25799 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nfkb1P25799 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.29□□□□□ -0.28
Nfkb1P25799 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.29□□□□□ -0.28
Nfkb1P25799 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.29□□□□□ -0.28
Nfkb1P25799 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.29□□□□□ -0.28
Nfkb1P25799 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nfkb1P25799 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.29□□□□□ -0.28
Nfkb1P25799 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nfkb1P25799 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nfkb1P25799 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nfkb1P25799 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nfkb1P25799 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Nfkb1P25799 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nfkb1P25799 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nfkb1P25799 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nfkb1P25799 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.29□□□□□ -0.28
Nfkb1P25799 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nfkb1P25799 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nfkb1P25799 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.29□□□□□ -0.28
Nfkb1P25799 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nfkb1P25799 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nfkb1P25799 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nfkb1P25799 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nfkb1P25799 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nfkb1P25799 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nfkb1P25799 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Nfkb1P25799 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nfkb1P25799 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nfkb1P25799 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.28□□□□□ -0.28
Nfkb1P25799 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nfkb1P25799 Gm12502-201ENSMUST00000120197 444 ntBASIC13.28□□□□□ -0.28
Nfkb1P25799 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.28□□□□□ -0.28
Nfkb1P25799 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.28□□□□□ -0.28
Nfkb1P25799 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nfkb1P25799 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nfkb1P25799 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nfkb1P25799 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.28□□□□□ -0.28
Nfkb1P25799 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nfkb1P25799 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nfkb1P25799 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nfkb1P25799 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nfkb1P25799 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nfkb1P25799 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.28□□□□□ -0.28
Nfkb1P25799 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nfkb1P25799 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nfkb1P25799 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nfkb1P25799 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nfkb1P25799 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nfkb1P25799 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nfkb1P25799 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nfkb1P25799 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nfkb1P25799 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nfkb1P25799 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nfkb1P25799 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nfkb1P25799 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.27□□□□□ -0.28
Nfkb1P25799 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nfkb1P25799 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nfkb1P25799 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Nfkb1P25799 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nfkb1P25799 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.27□□□□□ -0.28
Nfkb1P25799 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.27□□□□□ -0.28
Nfkb1P25799 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nfkb1P25799 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nfkb1P25799 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Nfkb1P25799 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nfkb1P25799 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nfkb1P25799 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nfkb1P25799 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nfkb1P25799 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nfkb1P25799 Mir874-201ENSMUST00000104769 76 ntBASIC13.27□□□□□ -0.29
Nfkb1P25799 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.27□□□□□ -0.29
Nfkb1P25799 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nfkb1P25799 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.27□□□□□ -0.29
Nfkb1P25799 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Nfkb1P25799 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.27□□□□□ -0.29
Nfkb1P25799 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.27□□□□□ -0.29
Nfkb1P25799 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.27□□□□□ -0.29
Nfkb1P25799 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nfkb1P25799 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Nfkb1P25799 Gm19931-201ENSMUST00000198920 368 ntBASIC13.27□□□□□ -0.29
Nfkb1P25799 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.27□□□□□ -0.29
Nfkb1P25799 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Nfkb1P25799 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nfkb1P25799 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nfkb1P25799 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.27□□□□□ -0.29
Nfkb1P25799 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Nfkb1P25799 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.27□□□□□ -0.29
Nfkb1P25799 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nfkb1P25799 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nfkb1P25799 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nfkb1P25799 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nfkb1P25799 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nfkb1P25799 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nfkb1P25799 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nfkb1P25799 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.27□□□□□ -0.29
Nfkb1P25799 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms