Protein–RNA interactions for Protein: P06728

Apoa4, Apolipoprotein A-IV, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa4P06728 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Apoa4P06728 Mir7654-201ENSMUST00000185082 70 ntBASIC12.72□□□□□ -0.37
Apoa4P06728 Gm37917-201ENSMUST00000194711 392 ntBASIC12.72□□□□□ -0.37
Apoa4P06728 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Apoa4P06728 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Apoa4P06728 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Apoa4P06728 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Apoa4P06728 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Apoa4P06728 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Apoa4P06728 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Apoa4P06728 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Apoa4P06728 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Apoa4P06728 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Apoa4P06728 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Apoa4P06728 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Apoa4P06728 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.72□□□□□ -0.37
Apoa4P06728 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
Apoa4P06728 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Apoa4P06728 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Apoa4P06728 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Apoa4P06728 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Apoa4P06728 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.71□□□□□ -0.37
Apoa4P06728 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Apoa4P06728 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Apoa4P06728 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Apoa4P06728 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Apoa4P06728 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Apoa4P06728 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Apoa4P06728 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Apoa4P06728 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Apoa4P06728 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Apoa4P06728 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Apoa4P06728 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Apoa4P06728 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Apoa4P06728 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Apoa4P06728 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Apoa4P06728 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Apoa4P06728 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Apoa4P06728 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Apoa4P06728 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Apoa4P06728 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Apoa4P06728 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Apoa4P06728 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.71□□□□□ -0.37
Apoa4P06728 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Apoa4P06728 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Apoa4P06728 Gm44397-201ENSMUST00000195950 113 ntBASIC12.71□□□□□ -0.37
Apoa4P06728 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.71□□□□□ -0.37
Apoa4P06728 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.71□□□□□ -0.37
Apoa4P06728 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Apoa4P06728 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.71□□□□□ -0.37
Apoa4P06728 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Apoa4P06728 Gm6983-201ENSMUST00000214912 628 ntBASIC12.71□□□□□ -0.37
Apoa4P06728 Gm18624-201ENSMUST00000220966 658 ntBASIC12.71□□□□□ -0.37
Apoa4P06728 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Apoa4P06728 Gm15823-201ENSMUST00000064305 670 ntBASIC12.71□□□□□ -0.37
Apoa4P06728 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Apoa4P06728 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Apoa4P06728 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Apoa4P06728 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.71□□□□□ -0.38
Apoa4P06728 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Apoa4P06728 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Apoa4P06728 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.71□□□□□ -0.38
Apoa4P06728 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Apoa4P06728 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Apoa4P06728 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Apoa4P06728 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
Apoa4P06728 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Apoa4P06728 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Apoa4P06728 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Apoa4P06728 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.7□□□□□ -0.38
Apoa4P06728 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Apoa4P06728 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Apoa4P06728 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.7□□□□□ -0.38
Apoa4P06728 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.7□□□□□ -0.38
Apoa4P06728 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Apoa4P06728 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Apoa4P06728 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Apoa4P06728 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Apoa4P06728 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Apoa4P06728 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Apoa4P06728 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Apoa4P06728 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.7□□□□□ -0.38
Apoa4P06728 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Apoa4P06728 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Apoa4P06728 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.7□□□□□ -0.38
Apoa4P06728 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Apoa4P06728 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Apoa4P06728 Gm12859-201ENSMUST00000117834 427 ntBASIC12.7□□□□□ -0.38
Apoa4P06728 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Apoa4P06728 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Apoa4P06728 Gm5866-201ENSMUST00000177881 973 ntBASIC12.7□□□□□ -0.38
Apoa4P06728 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.7□□□□□ -0.38
Apoa4P06728 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.7□□□□□ -0.38
Apoa4P06728 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.7□□□□□ -0.38
Apoa4P06728 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Apoa4P06728 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Apoa4P06728 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.7□□□□□ -0.38
Apoa4P06728 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Apoa4P06728 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Apoa4P06728 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms