Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm27989-201ENSMUST00000184721 107 ntBASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Mir7023-201ENSMUST00000185093 64 ntBASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdh1F7BJK1 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.65□□□□□ -0.55
Pcdh1F7BJK1 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdh1F7BJK1 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdh1F7BJK1 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdh1F7BJK1 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Pcdh1F7BJK1 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Gm26315-201ENSMUST00000083890 321 ntBASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.64□□□□□ -0.55
Pcdh1F7BJK1 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Daam2-202ENSMUST00000224595 1926 ntBASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms