Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.36□□□□□ -0.75
Chd6A3KFM7 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.36□□□□□ -0.75
Chd6A3KFM7 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Gm14644-201ENSMUST00000116671 647 ntBASIC10.35□□□□□ -0.75
Chd6A3KFM7 Gm29304-201ENSMUST00000186555 695 ntBASIC10.35□□□□□ -0.75
Chd6A3KFM7 Gm29223-201ENSMUST00000188867 695 ntBASIC10.35□□□□□ -0.75
Chd6A3KFM7 Gm37921-201ENSMUST00000194333 695 ntBASIC10.35□□□□□ -0.75
Chd6A3KFM7 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Chd6A3KFM7 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.35□□□□□ -0.75
Chd6A3KFM7 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.35□□□□□ -0.75
Chd6A3KFM7 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Gm15352-201ENSMUST00000118696 270 ntBASIC10.35□□□□□ -0.75
Chd6A3KFM7 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.35□□□□□ -0.75
Chd6A3KFM7 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Gm24248-201ENSMUST00000157321 322 ntBASIC10.35□□□□□ -0.75
Chd6A3KFM7 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Gm9116-201ENSMUST00000192400 1018 ntBASIC10.35□□□□□ -0.75
Chd6A3KFM7 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Chd6A3KFM7 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd6A3KFM7 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd6A3KFM7 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Chd6A3KFM7 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd6A3KFM7 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Chd6A3KFM7 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.34□□□□□ -0.75
Chd6A3KFM7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd6A3KFM7 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chd6A3KFM7 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms