Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.87□□□□□ -0.67
Trav5-4A0A075B652 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.87□□□□□ -0.67
Trav5-4A0A075B652 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trav5-4A0A075B652 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC10.87□□□□□ -0.67
Trav5-4A0A075B652 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.87□□□□□ -0.67
Trav5-4A0A075B652 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav5-4A0A075B652 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.87□□□□□ -0.67
Trav5-4A0A075B652 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5-4A0A075B652 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.87□□□□□ -0.67
Trav5-4A0A075B652 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5-4A0A075B652 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5-4A0A075B652 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5-4A0A075B652 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5-4A0A075B652 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5-4A0A075B652 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5-4A0A075B652 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5-4A0A075B652 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5-4A0A075B652 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav5-4A0A075B652 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Gm38223-201ENSMUST00000194484 695 ntBASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Gm19931-201ENSMUST00000198920 368 ntBASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Gm26315-201ENSMUST00000083890 321 ntBASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5-4A0A075B652 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms