Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Atp6v1c1Q9Z1G3 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.59■□□□□ 0.89
Atp6v1c1Q9Z1G3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp6v1c1Q9Z1G3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Atp6v1c1Q9Z1G3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp6v1c1Q9Z1G3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atp6v1c1Q9Z1G3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Atp6v1c1Q9Z1G3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atp6v1c1Q9Z1G3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Atp6v1c1Q9Z1G3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Atp6v1c1Q9Z1G3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atp6v1c1Q9Z1G3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atp6v1c1Q9Z1G3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atp6v1c1Q9Z1G3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atp6v1c1Q9Z1G3 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.57■□□□□ 0.88
Atp6v1c1Q9Z1G3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atp6v1c1Q9Z1G3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atp6v1c1Q9Z1G3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atp6v1c1Q9Z1G3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Atp6v1c1Q9Z1G3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.56■□□□□ 0.88
Atp6v1c1Q9Z1G3 Gm6311-201ENSMUST00000073790 878 ntBASIC20.56■□□□□ 0.88
Atp6v1c1Q9Z1G3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atp6v1c1Q9Z1G3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atp6v1c1Q9Z1G3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.56■□□□□ 0.88
Atp6v1c1Q9Z1G3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atp6v1c1Q9Z1G3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Atp6v1c1Q9Z1G3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Atp6v1c1Q9Z1G3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.55■□□□□ 0.88
Atp6v1c1Q9Z1G3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.55■□□□□ 0.88
Atp6v1c1Q9Z1G3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atp6v1c1Q9Z1G3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atp6v1c1Q9Z1G3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp6v1c1Q9Z1G3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp6v1c1Q9Z1G3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp6v1c1Q9Z1G3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Atp6v1c1Q9Z1G3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.54■□□□□ 0.88
Atp6v1c1Q9Z1G3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.54■□□□□ 0.88
Atp6v1c1Q9Z1G3 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.53■□□□□ 0.88
Atp6v1c1Q9Z1G3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp6v1c1Q9Z1G3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Atp6v1c1Q9Z1G3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp6v1c1Q9Z1G3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atp6v1c1Q9Z1G3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atp6v1c1Q9Z1G3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp6v1c1Q9Z1G3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp6v1c1Q9Z1G3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Atp6v1c1Q9Z1G3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Atp6v1c1Q9Z1G3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Atp6v1c1Q9Z1G3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp6v1c1Q9Z1G3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.52■□□□□ 0.87
Atp6v1c1Q9Z1G3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Atp6v1c1Q9Z1G3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Atp6v1c1Q9Z1G3 Terc-201ENSMUST00000082862 423 ntBASIC20.51■□□□□ 0.87
Atp6v1c1Q9Z1G3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp6v1c1Q9Z1G3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp6v1c1Q9Z1G3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atp6v1c1Q9Z1G3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atp6v1c1Q9Z1G3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp6v1c1Q9Z1G3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp6v1c1Q9Z1G3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp6v1c1Q9Z1G3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp6v1c1Q9Z1G3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.5■□□□□ 0.87
Atp6v1c1Q9Z1G3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp6v1c1Q9Z1G3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Atp6v1c1Q9Z1G3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp6v1c1Q9Z1G3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp6v1c1Q9Z1G3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Atp6v1c1Q9Z1G3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp6v1c1Q9Z1G3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Atp6v1c1Q9Z1G3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Atp6v1c1Q9Z1G3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.49■□□□□ 0.87
Atp6v1c1Q9Z1G3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Atp6v1c1Q9Z1G3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Atp6v1c1Q9Z1G3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atp6v1c1Q9Z1G3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atp6v1c1Q9Z1G3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atp6v1c1Q9Z1G3 Gm22567-201ENSMUST00000175542 342 ntBASIC20.48■□□□□ 0.87
Atp6v1c1Q9Z1G3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.48■□□□□ 0.87
Atp6v1c1Q9Z1G3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.48■□□□□ 0.87
Atp6v1c1Q9Z1G3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Atp6v1c1Q9Z1G3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atp6v1c1Q9Z1G3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Atp6v1c1Q9Z1G3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.48■□□□□ 0.87
Atp6v1c1Q9Z1G3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atp6v1c1Q9Z1G3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atp6v1c1Q9Z1G3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atp6v1c1Q9Z1G3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atp6v1c1Q9Z1G3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atp6v1c1Q9Z1G3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atp6v1c1Q9Z1G3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atp6v1c1Q9Z1G3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atp6v1c1Q9Z1G3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Atp6v1c1Q9Z1G3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Atp6v1c1Q9Z1G3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Atp6v1c1Q9Z1G3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Atp6v1c1Q9Z1G3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Atp6v1c1Q9Z1G3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atp6v1c1Q9Z1G3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atp6v1c1Q9Z1G3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atp6v1c1Q9Z1G3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms