Protein–RNA interactions for Protein: Q9R0T8

Ikbke, Inhibitor of nuclear factor kappa-B kinase subunit epsilon, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkeQ9R0T8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
IkbkeQ9R0T8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
IkbkeQ9R0T8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.9■■□□□ 1.1
IkbkeQ9R0T8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
IkbkeQ9R0T8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
IkbkeQ9R0T8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
IkbkeQ9R0T8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
IkbkeQ9R0T8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
IkbkeQ9R0T8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
IkbkeQ9R0T8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.89■■□□□ 1.09
IkbkeQ9R0T8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
IkbkeQ9R0T8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
IkbkeQ9R0T8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.89■■□□□ 1.09
IkbkeQ9R0T8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.88■■□□□ 1.09
IkbkeQ9R0T8 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.88■■□□□ 1.09
IkbkeQ9R0T8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IkbkeQ9R0T8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.88■■□□□ 1.09
IkbkeQ9R0T8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IkbkeQ9R0T8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IkbkeQ9R0T8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
IkbkeQ9R0T8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IkbkeQ9R0T8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
IkbkeQ9R0T8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
IkbkeQ9R0T8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
IkbkeQ9R0T8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
IkbkeQ9R0T8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.87■■□□□ 1.09
IkbkeQ9R0T8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.87■■□□□ 1.09
IkbkeQ9R0T8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
IkbkeQ9R0T8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
IkbkeQ9R0T8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
IkbkeQ9R0T8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
IkbkeQ9R0T8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
IkbkeQ9R0T8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
IkbkeQ9R0T8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
IkbkeQ9R0T8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
IkbkeQ9R0T8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
IkbkeQ9R0T8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
IkbkeQ9R0T8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
IkbkeQ9R0T8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
IkbkeQ9R0T8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
IkbkeQ9R0T8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.85■■□□□ 1.09
IkbkeQ9R0T8 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.85■■□□□ 1.09
IkbkeQ9R0T8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
IkbkeQ9R0T8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
IkbkeQ9R0T8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
IkbkeQ9R0T8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
IkbkeQ9R0T8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
IkbkeQ9R0T8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.84■■□□□ 1.09
IkbkeQ9R0T8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
IkbkeQ9R0T8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
IkbkeQ9R0T8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
IkbkeQ9R0T8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.84■■□□□ 1.09
IkbkeQ9R0T8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
IkbkeQ9R0T8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
IkbkeQ9R0T8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
IkbkeQ9R0T8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.83■■□□□ 1.09
IkbkeQ9R0T8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
IkbkeQ9R0T8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
IkbkeQ9R0T8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
IkbkeQ9R0T8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
IkbkeQ9R0T8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
IkbkeQ9R0T8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
IkbkeQ9R0T8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.82■■□□□ 1.08
IkbkeQ9R0T8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
IkbkeQ9R0T8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
IkbkeQ9R0T8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
IkbkeQ9R0T8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
IkbkeQ9R0T8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
IkbkeQ9R0T8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
IkbkeQ9R0T8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IkbkeQ9R0T8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
IkbkeQ9R0T8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
IkbkeQ9R0T8 Gm22238-201ENSMUST00000175222 88 ntBASIC21.81■■□□□ 1.08
IkbkeQ9R0T8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
IkbkeQ9R0T8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IkbkeQ9R0T8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
IkbkeQ9R0T8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
IkbkeQ9R0T8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
IkbkeQ9R0T8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
IkbkeQ9R0T8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
IkbkeQ9R0T8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.8■■□□□ 1.08
IkbkeQ9R0T8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
IkbkeQ9R0T8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
IkbkeQ9R0T8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IkbkeQ9R0T8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
IkbkeQ9R0T8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IkbkeQ9R0T8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.79■■□□□ 1.08
IkbkeQ9R0T8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
IkbkeQ9R0T8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IkbkeQ9R0T8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
IkbkeQ9R0T8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
IkbkeQ9R0T8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
IkbkeQ9R0T8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
IkbkeQ9R0T8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
IkbkeQ9R0T8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
IkbkeQ9R0T8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
IkbkeQ9R0T8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
IkbkeQ9R0T8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
IkbkeQ9R0T8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.77■■□□□ 1.08
IkbkeQ9R0T8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms