Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Zc3h8Q9JJ48 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Zc3h8Q9JJ48 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Zc3h8Q9JJ48 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Zc3h8Q9JJ48 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Zc3h8Q9JJ48 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.68■□□□□ 0.74
Zc3h8Q9JJ48 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Zc3h8Q9JJ48 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Zc3h8Q9JJ48 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Zc3h8Q9JJ48 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.67■□□□□ 0.74
Zc3h8Q9JJ48 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.67■□□□□ 0.74
Zc3h8Q9JJ48 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Zc3h8Q9JJ48 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Zc3h8Q9JJ48 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Zc3h8Q9JJ48 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Zc3h8Q9JJ48 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Zc3h8Q9JJ48 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Zc3h8Q9JJ48 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Zc3h8Q9JJ48 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Zc3h8Q9JJ48 Gm14117-201ENSMUST00000122417 843 ntBASIC19.66■□□□□ 0.74
Zc3h8Q9JJ48 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Zc3h8Q9JJ48 Gm10399-202ENSMUST00000202768 748 ntBASIC19.66■□□□□ 0.74
Zc3h8Q9JJ48 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.66■□□□□ 0.74
Zc3h8Q9JJ48 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Zc3h8Q9JJ48 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Zc3h8Q9JJ48 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Zc3h8Q9JJ48 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.65■□□□□ 0.74
Zc3h8Q9JJ48 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Zc3h8Q9JJ48 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Zc3h8Q9JJ48 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Zc3h8Q9JJ48 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.65■□□□□ 0.74
Zc3h8Q9JJ48 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.65■□□□□ 0.74
Zc3h8Q9JJ48 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.65■□□□□ 0.74
Zc3h8Q9JJ48 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Zc3h8Q9JJ48 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Zc3h8Q9JJ48 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.64■□□□□ 0.74
Zc3h8Q9JJ48 Etf1-202ENSMUST00000180351 108 ntBASIC19.64■□□□□ 0.73
Zc3h8Q9JJ48 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Zc3h8Q9JJ48 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Zc3h8Q9JJ48 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Zc3h8Q9JJ48 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Zc3h8Q9JJ48 Gm40881-201ENSMUST00000223397 166 ntBASIC19.63■□□□□ 0.73
Zc3h8Q9JJ48 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.63■□□□□ 0.73
Zc3h8Q9JJ48 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Zc3h8Q9JJ48 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Zc3h8Q9JJ48 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.62■□□□□ 0.73
Zc3h8Q9JJ48 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Zc3h8Q9JJ48 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Zc3h8Q9JJ48 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Zc3h8Q9JJ48 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.62■□□□□ 0.73
Zc3h8Q9JJ48 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Zc3h8Q9JJ48 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Zc3h8Q9JJ48 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Zc3h8Q9JJ48 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Zc3h8Q9JJ48 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.61■□□□□ 0.73
Zc3h8Q9JJ48 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Zc3h8Q9JJ48 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Zc3h8Q9JJ48 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Zc3h8Q9JJ48 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Zc3h8Q9JJ48 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.6■□□□□ 0.73
Zc3h8Q9JJ48 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.6■□□□□ 0.73
Zc3h8Q9JJ48 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Zc3h8Q9JJ48 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Zc3h8Q9JJ48 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Zc3h8Q9JJ48 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Zc3h8Q9JJ48 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Zc3h8Q9JJ48 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Zc3h8Q9JJ48 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Zc3h8Q9JJ48 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Zc3h8Q9JJ48 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Zc3h8Q9JJ48 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.59■□□□□ 0.73
Zc3h8Q9JJ48 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Zc3h8Q9JJ48 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Zc3h8Q9JJ48 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Zc3h8Q9JJ48 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Zc3h8Q9JJ48 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.58■□□□□ 0.73
Zc3h8Q9JJ48 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.58■□□□□ 0.72
Zc3h8Q9JJ48 Gm7417-201ENSMUST00000192950 473 ntBASIC19.58■□□□□ 0.72
Zc3h8Q9JJ48 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Zc3h8Q9JJ48 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Zc3h8Q9JJ48 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.57■□□□□ 0.72
Zc3h8Q9JJ48 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Zc3h8Q9JJ48 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Zc3h8Q9JJ48 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Zc3h8Q9JJ48 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Zc3h8Q9JJ48 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.57■□□□□ 0.72
Zc3h8Q9JJ48 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Zc3h8Q9JJ48 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Zc3h8Q9JJ48 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Zc3h8Q9JJ48 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Zc3h8Q9JJ48 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Zc3h8Q9JJ48 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.55■□□□□ 0.72
Zc3h8Q9JJ48 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Zc3h8Q9JJ48 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.55■□□□□ 0.72
Zc3h8Q9JJ48 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Zc3h8Q9JJ48 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Zc3h8Q9JJ48 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Zc3h8Q9JJ48 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Zc3h8Q9JJ48 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Zc3h8Q9JJ48 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms