Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rbfox1Q9JJ43 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rbfox1Q9JJ43 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rbfox1Q9JJ43 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.99■□□□□ 0.47
Rbfox1Q9JJ43 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rbfox1Q9JJ43 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Rbfox1Q9JJ43 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rbfox1Q9JJ43 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rbfox1Q9JJ43 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rbfox1Q9JJ43 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rbfox1Q9JJ43 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.98■□□□□ 0.47
Rbfox1Q9JJ43 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rbfox1Q9JJ43 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rbfox1Q9JJ43 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Rbfox1Q9JJ43 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rbfox1Q9JJ43 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rbfox1Q9JJ43 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rbfox1Q9JJ43 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rbfox1Q9JJ43 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rbfox1Q9JJ43 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rbfox1Q9JJ43 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rbfox1Q9JJ43 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rbfox1Q9JJ43 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rbfox1Q9JJ43 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rbfox1Q9JJ43 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rbfox1Q9JJ43 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rbfox1Q9JJ43 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rbfox1Q9JJ43 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.97■□□□□ 0.47
Rbfox1Q9JJ43 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rbfox1Q9JJ43 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.97■□□□□ 0.47
Rbfox1Q9JJ43 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rbfox1Q9JJ43 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rbfox1Q9JJ43 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rbfox1Q9JJ43 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Rbfox1Q9JJ43 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rbfox1Q9JJ43 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rbfox1Q9JJ43 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rbfox1Q9JJ43 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rbfox1Q9JJ43 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rbfox1Q9JJ43 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rbfox1Q9JJ43 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rbfox1Q9JJ43 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Rbfox1Q9JJ43 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rbfox1Q9JJ43 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rbfox1Q9JJ43 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rbfox1Q9JJ43 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.95■□□□□ 0.46
Rbfox1Q9JJ43 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rbfox1Q9JJ43 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rbfox1Q9JJ43 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rbfox1Q9JJ43 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rbfox1Q9JJ43 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rbfox1Q9JJ43 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.94■□□□□ 0.46
Rbfox1Q9JJ43 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rbfox1Q9JJ43 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rbfox1Q9JJ43 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rbfox1Q9JJ43 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rbfox1Q9JJ43 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rbfox1Q9JJ43 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.94■□□□□ 0.46
Rbfox1Q9JJ43 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rbfox1Q9JJ43 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rbfox1Q9JJ43 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rbfox1Q9JJ43 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rbfox1Q9JJ43 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rbfox1Q9JJ43 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rbfox1Q9JJ43 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rbfox1Q9JJ43 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rbfox1Q9JJ43 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rbfox1Q9JJ43 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rbfox1Q9JJ43 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Rbfox1Q9JJ43 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rbfox1Q9JJ43 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rbfox1Q9JJ43 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.92■□□□□ 0.46
Rbfox1Q9JJ43 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rbfox1Q9JJ43 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rbfox1Q9JJ43 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rbfox1Q9JJ43 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rbfox1Q9JJ43 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rbfox1Q9JJ43 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rbfox1Q9JJ43 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rbfox1Q9JJ43 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rbfox1Q9JJ43 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rbfox1Q9JJ43 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rbfox1Q9JJ43 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.91■□□□□ 0.46
Rbfox1Q9JJ43 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Rbfox1Q9JJ43 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rbfox1Q9JJ43 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rbfox1Q9JJ43 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rbfox1Q9JJ43 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rbfox1Q9JJ43 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rbfox1Q9JJ43 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rbfox1Q9JJ43 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Rbfox1Q9JJ43 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Rbfox1Q9JJ43 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rbfox1Q9JJ43 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rbfox1Q9JJ43 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.88■□□□□ 0.45
Rbfox1Q9JJ43 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.88■□□□□ 0.45
Rbfox1Q9JJ43 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
Rbfox1Q9JJ43 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rbfox1Q9JJ43 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.88■□□□□ 0.45
Rbfox1Q9JJ43 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms