Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim39Q9ESN2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.57■□□□□ 0.72
Trim39Q9ESN2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.57■□□□□ 0.72
Trim39Q9ESN2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim39Q9ESN2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Trim39Q9ESN2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trim39Q9ESN2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim39Q9ESN2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim39Q9ESN2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim39Q9ESN2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim39Q9ESN2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim39Q9ESN2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Trim39Q9ESN2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.55■□□□□ 0.72
Trim39Q9ESN2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim39Q9ESN2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim39Q9ESN2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim39Q9ESN2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim39Q9ESN2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim39Q9ESN2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim39Q9ESN2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim39Q9ESN2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim39Q9ESN2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Trim39Q9ESN2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim39Q9ESN2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim39Q9ESN2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim39Q9ESN2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim39Q9ESN2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.53■□□□□ 0.72
Trim39Q9ESN2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.53■□□□□ 0.72
Trim39Q9ESN2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.53■□□□□ 0.72
Trim39Q9ESN2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim39Q9ESN2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim39Q9ESN2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Trim39Q9ESN2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim39Q9ESN2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim39Q9ESN2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim39Q9ESN2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Trim39Q9ESN2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim39Q9ESN2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim39Q9ESN2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Trim39Q9ESN2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.52■□□□□ 0.71
Trim39Q9ESN2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim39Q9ESN2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim39Q9ESN2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim39Q9ESN2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim39Q9ESN2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.51■□□□□ 0.71
Trim39Q9ESN2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim39Q9ESN2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim39Q9ESN2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim39Q9ESN2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim39Q9ESN2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.5■□□□□ 0.71
Trim39Q9ESN2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim39Q9ESN2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim39Q9ESN2 Gm22567-201ENSMUST00000175542 342 ntBASIC19.5■□□□□ 0.71
Trim39Q9ESN2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim39Q9ESN2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim39Q9ESN2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim39Q9ESN2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim39Q9ESN2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim39Q9ESN2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Trim39Q9ESN2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim39Q9ESN2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.49■□□□□ 0.71
Trim39Q9ESN2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim39Q9ESN2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim39Q9ESN2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Trim39Q9ESN2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim39Q9ESN2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim39Q9ESN2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim39Q9ESN2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim39Q9ESN2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim39Q9ESN2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim39Q9ESN2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim39Q9ESN2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim39Q9ESN2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim39Q9ESN2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Trim39Q9ESN2 Cap2-205ENSMUST00000225824 1634 ntBASIC19.47■□□□□ 0.71
Trim39Q9ESN2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trim39Q9ESN2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Trim39Q9ESN2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.47■□□□□ 0.71
Trim39Q9ESN2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim39Q9ESN2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim39Q9ESN2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim39Q9ESN2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Trim39Q9ESN2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trim39Q9ESN2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim39Q9ESN2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim39Q9ESN2 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.47■□□□□ 0.71
Trim39Q9ESN2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim39Q9ESN2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim39Q9ESN2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim39Q9ESN2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim39Q9ESN2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Trim39Q9ESN2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.46■□□□□ 0.71
Trim39Q9ESN2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim39Q9ESN2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Trim39Q9ESN2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim39Q9ESN2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim39Q9ESN2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim39Q9ESN2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Trim39Q9ESN2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim39Q9ESN2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms