Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps35Q9EQH3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Vps35Q9EQH3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.15■□□□□ 0.98
Vps35Q9EQH3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vps35Q9EQH3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vps35Q9EQH3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vps35Q9EQH3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vps35Q9EQH3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Vps35Q9EQH3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Vps35Q9EQH3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.14■□□□□ 0.97
Vps35Q9EQH3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps35Q9EQH3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.14■□□□□ 0.97
Vps35Q9EQH3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps35Q9EQH3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps35Q9EQH3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Vps35Q9EQH3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Vps35Q9EQH3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps35Q9EQH3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Vps35Q9EQH3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Vps35Q9EQH3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps35Q9EQH3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.12■□□□□ 0.97
Vps35Q9EQH3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps35Q9EQH3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.12■□□□□ 0.97
Vps35Q9EQH3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps35Q9EQH3 Gm5812-201ENSMUST00000061073 957 ntBASIC21.12■□□□□ 0.97
Vps35Q9EQH3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps35Q9EQH3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Vps35Q9EQH3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps35Q9EQH3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps35Q9EQH3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.11■□□□□ 0.97
Vps35Q9EQH3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.1■□□□□ 0.97
Vps35Q9EQH3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.1■□□□□ 0.97
Vps35Q9EQH3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.1■□□□□ 0.97
Vps35Q9EQH3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Vps35Q9EQH3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.1■□□□□ 0.97
Vps35Q9EQH3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps35Q9EQH3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps35Q9EQH3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Vps35Q9EQH3 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.1■□□□□ 0.97
Vps35Q9EQH3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps35Q9EQH3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vps35Q9EQH3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vps35Q9EQH3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Vps35Q9EQH3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Vps35Q9EQH3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Vps35Q9EQH3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vps35Q9EQH3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vps35Q9EQH3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.09■□□□□ 0.97
Vps35Q9EQH3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.09■□□□□ 0.97
Vps35Q9EQH3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps35Q9EQH3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Vps35Q9EQH3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Vps35Q9EQH3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Vps35Q9EQH3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.08■□□□□ 0.97
Vps35Q9EQH3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps35Q9EQH3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Vps35Q9EQH3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
Vps35Q9EQH3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps35Q9EQH3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps35Q9EQH3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps35Q9EQH3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.07■□□□□ 0.96
Vps35Q9EQH3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Vps35Q9EQH3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps35Q9EQH3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Vps35Q9EQH3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.07■□□□□ 0.96
Vps35Q9EQH3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Vps35Q9EQH3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps35Q9EQH3 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.06■□□□□ 0.96
Vps35Q9EQH3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps35Q9EQH3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps35Q9EQH3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps35Q9EQH3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps35Q9EQH3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps35Q9EQH3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vps35Q9EQH3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Vps35Q9EQH3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vps35Q9EQH3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.05■□□□□ 0.96
Vps35Q9EQH3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vps35Q9EQH3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Vps35Q9EQH3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vps35Q9EQH3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vps35Q9EQH3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
Vps35Q9EQH3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vps35Q9EQH3 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.04■□□□□ 0.96
Vps35Q9EQH3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.04■□□□□ 0.96
Vps35Q9EQH3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.04■□□□□ 0.96
Vps35Q9EQH3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Vps35Q9EQH3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vps35Q9EQH3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Vps35Q9EQH3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Vps35Q9EQH3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Vps35Q9EQH3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Vps35Q9EQH3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vps35Q9EQH3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vps35Q9EQH3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Vps35Q9EQH3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Vps35Q9EQH3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Vps35Q9EQH3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.03■□□□□ 0.96
Vps35Q9EQH3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vps35Q9EQH3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms