Protein–RNA interactions for Protein: Q9DBF7

Cwc25, Pre-mRNA-splicing factor CWC25 homolog, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cwc25Q9DBF7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cwc25Q9DBF7 AC116713.1-201ENSMUST00000215074 430 ntBASIC26.31■■□□□ 1.8
Cwc25Q9DBF7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cwc25Q9DBF7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cwc25Q9DBF7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC26.3■■□□□ 1.8
Cwc25Q9DBF7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC26.3■■□□□ 1.8
Cwc25Q9DBF7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Cwc25Q9DBF7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Cwc25Q9DBF7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Cwc25Q9DBF7 Gm9847-201ENSMUST00000052528 599 ntBASIC26.3■■□□□ 1.8
Cwc25Q9DBF7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Cwc25Q9DBF7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Cwc25Q9DBF7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cwc25Q9DBF7 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cwc25Q9DBF7 Gm13241-201ENSMUST00000094493 780 ntBASIC26.29■■□□□ 1.8
Cwc25Q9DBF7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cwc25Q9DBF7 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Cwc25Q9DBF7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cwc25Q9DBF7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cwc25Q9DBF7 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC26.28■■□□□ 1.8
Cwc25Q9DBF7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC26.28■■□□□ 1.8
Cwc25Q9DBF7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC26.28■■□□□ 1.8
Cwc25Q9DBF7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cwc25Q9DBF7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cwc25Q9DBF7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cwc25Q9DBF7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Cwc25Q9DBF7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC26.27■■□□□ 1.8
Cwc25Q9DBF7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Cwc25Q9DBF7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cwc25Q9DBF7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Cwc25Q9DBF7 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Cwc25Q9DBF7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cwc25Q9DBF7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC26.27■■□□□ 1.8
Cwc25Q9DBF7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cwc25Q9DBF7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cwc25Q9DBF7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cwc25Q9DBF7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
Cwc25Q9DBF7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cwc25Q9DBF7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cwc25Q9DBF7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cwc25Q9DBF7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cwc25Q9DBF7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cwc25Q9DBF7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Cwc25Q9DBF7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cwc25Q9DBF7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Cwc25Q9DBF7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC26.25■■□□□ 1.79
Cwc25Q9DBF7 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cwc25Q9DBF7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cwc25Q9DBF7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Cwc25Q9DBF7 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cwc25Q9DBF7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cwc25Q9DBF7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cwc25Q9DBF7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cwc25Q9DBF7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC26.23■■□□□ 1.79
Cwc25Q9DBF7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Cwc25Q9DBF7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC26.23■■□□□ 1.79
Cwc25Q9DBF7 Gm12922-201ENSMUST00000120626 809 ntBASIC26.23■■□□□ 1.79
Cwc25Q9DBF7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Cwc25Q9DBF7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cwc25Q9DBF7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Cwc25Q9DBF7 Gm43034-201ENSMUST00000198678 1364 ntBASIC26.22■■□□□ 1.79
Cwc25Q9DBF7 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Cwc25Q9DBF7 Gm21956-201ENSMUST00000179946 522 ntBASIC26.22■■□□□ 1.79
Cwc25Q9DBF7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC26.22■■□□□ 1.79
Cwc25Q9DBF7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC26.22■■□□□ 1.79
Cwc25Q9DBF7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Cwc25Q9DBF7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Cwc25Q9DBF7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC26.21■■□□□ 1.79
Cwc25Q9DBF7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Cwc25Q9DBF7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Cwc25Q9DBF7 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Cwc25Q9DBF7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Cwc25Q9DBF7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC26.2■■□□□ 1.79
Cwc25Q9DBF7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC26.2■■□□□ 1.78
Cwc25Q9DBF7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
Cwc25Q9DBF7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cwc25Q9DBF7 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC26.19■■□□□ 1.78
Cwc25Q9DBF7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC26.19■■□□□ 1.78
Cwc25Q9DBF7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Cwc25Q9DBF7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC26.19■■□□□ 1.78
Cwc25Q9DBF7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cwc25Q9DBF7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
Cwc25Q9DBF7 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cwc25Q9DBF7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC26.18■■□□□ 1.78
Cwc25Q9DBF7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cwc25Q9DBF7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC26.17■■□□□ 1.78
Cwc25Q9DBF7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cwc25Q9DBF7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cwc25Q9DBF7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cwc25Q9DBF7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cwc25Q9DBF7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Cwc25Q9DBF7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Cwc25Q9DBF7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Cwc25Q9DBF7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
Cwc25Q9DBF7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Cwc25Q9DBF7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Cwc25Q9DBF7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Cwc25Q9DBF7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
Cwc25Q9DBF7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Cwc25Q9DBF7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC26.15■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms