Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Upk1aQ9D132 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Upk1aQ9D132 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Upk1aQ9D132 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Upk1aQ9D132 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Upk1aQ9D132 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Upk1aQ9D132 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Upk1aQ9D132 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Upk1aQ9D132 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Upk1aQ9D132 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Upk1aQ9D132 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Upk1aQ9D132 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Upk1aQ9D132 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Upk1aQ9D132 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Upk1aQ9D132 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Upk1aQ9D132 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.1■□□□□ 0.81
Upk1aQ9D132 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Upk1aQ9D132 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Upk1aQ9D132 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Upk1aQ9D132 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Upk1aQ9D132 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Upk1aQ9D132 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.09■□□□□ 0.81
Upk1aQ9D132 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Upk1aQ9D132 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.09■□□□□ 0.81
Upk1aQ9D132 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Upk1aQ9D132 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Upk1aQ9D132 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Upk1aQ9D132 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.08■□□□□ 0.81
Upk1aQ9D132 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Upk1aQ9D132 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Upk1aQ9D132 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
Upk1aQ9D132 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Upk1aQ9D132 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Upk1aQ9D132 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Upk1aQ9D132 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Upk1aQ9D132 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Upk1aQ9D132 Gm6311-201ENSMUST00000073790 878 ntBASIC20.07■□□□□ 0.8
Upk1aQ9D132 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Upk1aQ9D132 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Upk1aQ9D132 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Upk1aQ9D132 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.06■□□□□ 0.8
Upk1aQ9D132 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Upk1aQ9D132 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Upk1aQ9D132 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Upk1aQ9D132 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Upk1aQ9D132 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Upk1aQ9D132 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Upk1aQ9D132 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Upk1aQ9D132 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Upk1aQ9D132 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.06■□□□□ 0.8
Upk1aQ9D132 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Upk1aQ9D132 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Upk1aQ9D132 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Upk1aQ9D132 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Upk1aQ9D132 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Upk1aQ9D132 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.05■□□□□ 0.8
Upk1aQ9D132 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Upk1aQ9D132 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Upk1aQ9D132 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Upk1aQ9D132 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Upk1aQ9D132 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Upk1aQ9D132 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Upk1aQ9D132 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Upk1aQ9D132 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Upk1aQ9D132 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Upk1aQ9D132 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Upk1aQ9D132 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Upk1aQ9D132 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Upk1aQ9D132 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.04■□□□□ 0.8
Upk1aQ9D132 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Upk1aQ9D132 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Upk1aQ9D132 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Upk1aQ9D132 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Upk1aQ9D132 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Upk1aQ9D132 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Upk1aQ9D132 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Upk1aQ9D132 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Upk1aQ9D132 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Upk1aQ9D132 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Upk1aQ9D132 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Upk1aQ9D132 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Upk1aQ9D132 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Upk1aQ9D132 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Upk1aQ9D132 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Upk1aQ9D132 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Upk1aQ9D132 Gm44428-201ENSMUST00000204474 874 ntBASIC20.02■□□□□ 0.8
Upk1aQ9D132 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Upk1aQ9D132 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Upk1aQ9D132 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Upk1aQ9D132 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Upk1aQ9D132 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Upk1aQ9D132 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Upk1aQ9D132 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Upk1aQ9D132 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Upk1aQ9D132 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upk1aQ9D132 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upk1aQ9D132 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upk1aQ9D132 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upk1aQ9D132 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Upk1aQ9D132 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms