Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.27■□□□□ 0.84
Khdc3Q9CWU5 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Khdc3Q9CWU5 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Khdc3Q9CWU5 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Khdc3Q9CWU5 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Khdc3Q9CWU5 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Khdc3Q9CWU5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Khdc3Q9CWU5 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Khdc3Q9CWU5 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Khdc3Q9CWU5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Khdc3Q9CWU5 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Khdc3Q9CWU5 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Khdc3Q9CWU5 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.26■□□□□ 0.83
Khdc3Q9CWU5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.26■□□□□ 0.83
Khdc3Q9CWU5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Khdc3Q9CWU5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Khdc3Q9CWU5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Khdc3Q9CWU5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.25■□□□□ 0.83
Khdc3Q9CWU5 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Khdc3Q9CWU5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Khdc3Q9CWU5 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Khdc3Q9CWU5 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Khdc3Q9CWU5 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Khdc3Q9CWU5 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Khdc3Q9CWU5 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Khdc3Q9CWU5 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.24■□□□□ 0.83
Khdc3Q9CWU5 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Khdc3Q9CWU5 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Khdc3Q9CWU5 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
Khdc3Q9CWU5 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Khdc3Q9CWU5 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Khdc3Q9CWU5 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.24■□□□□ 0.83
Khdc3Q9CWU5 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Khdc3Q9CWU5 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.23■□□□□ 0.83
Khdc3Q9CWU5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Khdc3Q9CWU5 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Khdc3Q9CWU5 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Khdc3Q9CWU5 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Khdc3Q9CWU5 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.22■□□□□ 0.83
Khdc3Q9CWU5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Khdc3Q9CWU5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Khdc3Q9CWU5 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Khdc3Q9CWU5 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Khdc3Q9CWU5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Khdc3Q9CWU5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Khdc3Q9CWU5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Khdc3Q9CWU5 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Khdc3Q9CWU5 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Khdc3Q9CWU5 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.21■□□□□ 0.83
Khdc3Q9CWU5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Khdc3Q9CWU5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Khdc3Q9CWU5 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Khdc3Q9CWU5 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Khdc3Q9CWU5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Khdc3Q9CWU5 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.2■□□□□ 0.82
Khdc3Q9CWU5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.2■□□□□ 0.82
Khdc3Q9CWU5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.2■□□□□ 0.82
Khdc3Q9CWU5 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Khdc3Q9CWU5 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Khdc3Q9CWU5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Khdc3Q9CWU5 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Khdc3Q9CWU5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Khdc3Q9CWU5 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Khdc3Q9CWU5 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Khdc3Q9CWU5 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Khdc3Q9CWU5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Khdc3Q9CWU5 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.19■□□□□ 0.82
Khdc3Q9CWU5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Khdc3Q9CWU5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Khdc3Q9CWU5 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Khdc3Q9CWU5 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Khdc3Q9CWU5 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Khdc3Q9CWU5 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Khdc3Q9CWU5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Khdc3Q9CWU5 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Khdc3Q9CWU5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.18■□□□□ 0.82
Khdc3Q9CWU5 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Khdc3Q9CWU5 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Khdc3Q9CWU5 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Khdc3Q9CWU5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Khdc3Q9CWU5 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Khdc3Q9CWU5 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Khdc3Q9CWU5 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Khdc3Q9CWU5 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Khdc3Q9CWU5 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Khdc3Q9CWU5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Khdc3Q9CWU5 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Khdc3Q9CWU5 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Khdc3Q9CWU5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Khdc3Q9CWU5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Khdc3Q9CWU5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.16■□□□□ 0.82
Khdc3Q9CWU5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Khdc3Q9CWU5 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.16■□□□□ 0.82
Khdc3Q9CWU5 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Khdc3Q9CWU5 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Khdc3Q9CWU5 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Khdc3Q9CWU5 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Khdc3Q9CWU5 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Khdc3Q9CWU5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Khdc3Q9CWU5 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms