Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Otud1Q9CUB6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.06■□□□□ 0.8
Otud1Q9CUB6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Otud1Q9CUB6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Otud1Q9CUB6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Otud1Q9CUB6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Otud1Q9CUB6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Otud1Q9CUB6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Otud1Q9CUB6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Otud1Q9CUB6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Otud1Q9CUB6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.05■□□□□ 0.8
Otud1Q9CUB6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Otud1Q9CUB6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.05■□□□□ 0.8
Otud1Q9CUB6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.05■□□□□ 0.8
Otud1Q9CUB6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.05■□□□□ 0.8
Otud1Q9CUB6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Otud1Q9CUB6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Otud1Q9CUB6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Otud1Q9CUB6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Otud1Q9CUB6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Otud1Q9CUB6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.04■□□□□ 0.8
Otud1Q9CUB6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Otud1Q9CUB6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Otud1Q9CUB6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.03■□□□□ 0.8
Otud1Q9CUB6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.03■□□□□ 0.8
Otud1Q9CUB6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Otud1Q9CUB6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Otud1Q9CUB6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Otud1Q9CUB6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Otud1Q9CUB6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.02■□□□□ 0.8
Otud1Q9CUB6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Otud1Q9CUB6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Otud1Q9CUB6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Otud1Q9CUB6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Otud1Q9CUB6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Otud1Q9CUB6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Otud1Q9CUB6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Otud1Q9CUB6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Otud1Q9CUB6 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.02■□□□□ 0.79
Otud1Q9CUB6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Otud1Q9CUB6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Otud1Q9CUB6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Otud1Q9CUB6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Otud1Q9CUB6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Otud1Q9CUB6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Otud1Q9CUB6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Otud1Q9CUB6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Otud1Q9CUB6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.01■□□□□ 0.79
Otud1Q9CUB6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Otud1Q9CUB6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Otud1Q9CUB6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Otud1Q9CUB6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Otud1Q9CUB6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20■□□□□ 0.79
Otud1Q9CUB6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20■□□□□ 0.79
Otud1Q9CUB6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20■□□□□ 0.79
Otud1Q9CUB6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20■□□□□ 0.79
Otud1Q9CUB6 Gm10620-201ENSMUST00000098379 1332 ntBASIC20■□□□□ 0.79
Otud1Q9CUB6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Otud1Q9CUB6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Otud1Q9CUB6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Otud1Q9CUB6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Otud1Q9CUB6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Otud1Q9CUB6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Otud1Q9CUB6 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Otud1Q9CUB6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Otud1Q9CUB6 Gm40881-201ENSMUST00000223397 166 ntBASIC19.99■□□□□ 0.79
Otud1Q9CUB6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Otud1Q9CUB6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Otud1Q9CUB6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Otud1Q9CUB6 Gm7417-201ENSMUST00000192950 473 ntBASIC19.98■□□□□ 0.79
Otud1Q9CUB6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.98■□□□□ 0.79
Otud1Q9CUB6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Otud1Q9CUB6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.98■□□□□ 0.79
Otud1Q9CUB6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Otud1Q9CUB6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Otud1Q9CUB6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Otud1Q9CUB6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Otud1Q9CUB6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Otud1Q9CUB6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Otud1Q9CUB6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Otud1Q9CUB6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Otud1Q9CUB6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Otud1Q9CUB6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Otud1Q9CUB6 Gm10399-202ENSMUST00000202768 748 ntBASIC19.96■□□□□ 0.79
Otud1Q9CUB6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Otud1Q9CUB6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Otud1Q9CUB6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.95■□□□□ 0.78
Otud1Q9CUB6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.95■□□□□ 0.78
Otud1Q9CUB6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.95■□□□□ 0.78
Otud1Q9CUB6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Otud1Q9CUB6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.95■□□□□ 0.78
Otud1Q9CUB6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.95■□□□□ 0.78
Otud1Q9CUB6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Otud1Q9CUB6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Otud1Q9CUB6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Otud1Q9CUB6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Otud1Q9CUB6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.94■□□□□ 0.78
Otud1Q9CUB6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Otud1Q9CUB6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Otud1Q9CUB6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms