Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lrrc40Q9CRC8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Lrrc40Q9CRC8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lrrc40Q9CRC8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lrrc40Q9CRC8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lrrc40Q9CRC8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.07■□□□□ 0.96
Lrrc40Q9CRC8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Lrrc40Q9CRC8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lrrc40Q9CRC8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lrrc40Q9CRC8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lrrc40Q9CRC8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lrrc40Q9CRC8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Lrrc40Q9CRC8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lrrc40Q9CRC8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Lrrc40Q9CRC8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lrrc40Q9CRC8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lrrc40Q9CRC8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lrrc40Q9CRC8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lrrc40Q9CRC8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lrrc40Q9CRC8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.04■□□□□ 0.96
Lrrc40Q9CRC8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lrrc40Q9CRC8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.04■□□□□ 0.96
Lrrc40Q9CRC8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Lrrc40Q9CRC8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Lrrc40Q9CRC8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Lrrc40Q9CRC8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Lrrc40Q9CRC8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Lrrc40Q9CRC8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lrrc40Q9CRC8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lrrc40Q9CRC8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lrrc40Q9CRC8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lrrc40Q9CRC8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Lrrc40Q9CRC8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lrrc40Q9CRC8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Lrrc40Q9CRC8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Lrrc40Q9CRC8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
Lrrc40Q9CRC8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Lrrc40Q9CRC8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lrrc40Q9CRC8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lrrc40Q9CRC8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lrrc40Q9CRC8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21■□□□□ 0.95
Lrrc40Q9CRC8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Lrrc40Q9CRC8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lrrc40Q9CRC8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lrrc40Q9CRC8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lrrc40Q9CRC8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lrrc40Q9CRC8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lrrc40Q9CRC8 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.99■□□□□ 0.95
Lrrc40Q9CRC8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Lrrc40Q9CRC8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lrrc40Q9CRC8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lrrc40Q9CRC8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lrrc40Q9CRC8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lrrc40Q9CRC8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lrrc40Q9CRC8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lrrc40Q9CRC8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lrrc40Q9CRC8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lrrc40Q9CRC8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lrrc40Q9CRC8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lrrc40Q9CRC8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lrrc40Q9CRC8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lrrc40Q9CRC8 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.97■□□□□ 0.95
Lrrc40Q9CRC8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lrrc40Q9CRC8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Lrrc40Q9CRC8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Lrrc40Q9CRC8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lrrc40Q9CRC8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lrrc40Q9CRC8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Lrrc40Q9CRC8 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.97■□□□□ 0.95
Lrrc40Q9CRC8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.97■□□□□ 0.95
Lrrc40Q9CRC8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lrrc40Q9CRC8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lrrc40Q9CRC8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.96■□□□□ 0.95
Lrrc40Q9CRC8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.96■□□□□ 0.95
Lrrc40Q9CRC8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lrrc40Q9CRC8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Lrrc40Q9CRC8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lrrc40Q9CRC8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Lrrc40Q9CRC8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Lrrc40Q9CRC8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Lrrc40Q9CRC8 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.95■□□□□ 0.94
Lrrc40Q9CRC8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lrrc40Q9CRC8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lrrc40Q9CRC8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lrrc40Q9CRC8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lrrc40Q9CRC8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.95■□□□□ 0.94
Lrrc40Q9CRC8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lrrc40Q9CRC8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lrrc40Q9CRC8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lrrc40Q9CRC8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lrrc40Q9CRC8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lrrc40Q9CRC8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lrrc40Q9CRC8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lrrc40Q9CRC8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.93■□□□□ 0.94
Lrrc40Q9CRC8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.93■□□□□ 0.94
Lrrc40Q9CRC8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lrrc40Q9CRC8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lrrc40Q9CRC8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lrrc40Q9CRC8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lrrc40Q9CRC8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms