Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Trim34aQ99PP6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC26.35■■□□□ 1.81
Trim34aQ99PP6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC26.35■■□□□ 1.81
Trim34aQ99PP6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC26.35■■□□□ 1.81
Trim34aQ99PP6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC26.35■■□□□ 1.81
Trim34aQ99PP6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Trim34aQ99PP6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC26.35■■□□□ 1.81
Trim34aQ99PP6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trim34aQ99PP6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trim34aQ99PP6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trim34aQ99PP6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Trim34aQ99PP6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC26.34■■□□□ 1.81
Trim34aQ99PP6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trim34aQ99PP6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trim34aQ99PP6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Trim34aQ99PP6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Trim34aQ99PP6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
Trim34aQ99PP6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Trim34aQ99PP6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trim34aQ99PP6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trim34aQ99PP6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Trim34aQ99PP6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trim34aQ99PP6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Trim34aQ99PP6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Trim34aQ99PP6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
Trim34aQ99PP6 Gm45417-201ENSMUST00000209533 758 ntBASIC26.3■■□□□ 1.8
Trim34aQ99PP6 AC116713.1-201ENSMUST00000215074 430 ntBASIC26.3■■□□□ 1.8
Trim34aQ99PP6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Trim34aQ99PP6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Trim34aQ99PP6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC26.3■■□□□ 1.8
Trim34aQ99PP6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Trim34aQ99PP6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC26.29■■□□□ 1.8
Trim34aQ99PP6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC26.29■■□□□ 1.8
Trim34aQ99PP6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Trim34aQ99PP6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Trim34aQ99PP6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Trim34aQ99PP6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Trim34aQ99PP6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC26.28■■□□□ 1.8
Trim34aQ99PP6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC26.28■■□□□ 1.8
Trim34aQ99PP6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Trim34aQ99PP6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Trim34aQ99PP6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Trim34aQ99PP6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Trim34aQ99PP6 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Trim34aQ99PP6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Trim34aQ99PP6 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Trim34aQ99PP6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC26.26■■□□□ 1.79
Trim34aQ99PP6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trim34aQ99PP6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC26.26■■□□□ 1.79
Trim34aQ99PP6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trim34aQ99PP6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trim34aQ99PP6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trim34aQ99PP6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Trim34aQ99PP6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Trim34aQ99PP6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Trim34aQ99PP6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
Trim34aQ99PP6 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Trim34aQ99PP6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trim34aQ99PP6 Serp2-204ENSMUST00000228055 705 ntBASIC26.24■■□□□ 1.79
Trim34aQ99PP6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trim34aQ99PP6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
Trim34aQ99PP6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trim34aQ99PP6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC26.24■■□□□ 1.79
Trim34aQ99PP6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Trim34aQ99PP6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Trim34aQ99PP6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Trim34aQ99PP6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim34aQ99PP6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC26.22■■□□□ 1.79
Trim34aQ99PP6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim34aQ99PP6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim34aQ99PP6 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim34aQ99PP6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Trim34aQ99PP6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trim34aQ99PP6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC26.21■■□□□ 1.79
Trim34aQ99PP6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trim34aQ99PP6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trim34aQ99PP6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC26.21■■□□□ 1.79
Trim34aQ99PP6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Trim34aQ99PP6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC26.2■■□□□ 1.78
Trim34aQ99PP6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Trim34aQ99PP6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Trim34aQ99PP6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC26.2■■□□□ 1.78
Trim34aQ99PP6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trim34aQ99PP6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trim34aQ99PP6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Trim34aQ99PP6 Gm9207-201ENSMUST00000198773 1115 ntBASIC26.19■■□□□ 1.78
Trim34aQ99PP6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Trim34aQ99PP6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Trim34aQ99PP6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Trim34aQ99PP6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC26.19■■□□□ 1.78
Trim34aQ99PP6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Trim34aQ99PP6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC26.18■■□□□ 1.78
Trim34aQ99PP6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim34aQ99PP6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim34aQ99PP6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
Trim34aQ99PP6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC26.17■■□□□ 1.78
Trim34aQ99PP6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Trim34aQ99PP6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trim34aQ99PP6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trim34aQ99PP6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms