Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf111Q99ML9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf111Q99ML9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf111Q99ML9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf111Q99ML9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf111Q99ML9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf111Q99ML9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf111Q99ML9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf111Q99ML9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf111Q99ML9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf111Q99ML9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf111Q99ML9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
Rnf111Q99ML9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf111Q99ML9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.47■□□□□ 0.87
Rnf111Q99ML9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Rnf111Q99ML9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf111Q99ML9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rnf111Q99ML9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf111Q99ML9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf111Q99ML9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf111Q99ML9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf111Q99ML9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf111Q99ML9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf111Q99ML9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf111Q99ML9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf111Q99ML9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf111Q99ML9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.45■□□□□ 0.87
Rnf111Q99ML9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.45■□□□□ 0.86
Rnf111Q99ML9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf111Q99ML9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf111Q99ML9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf111Q99ML9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.45■□□□□ 0.86
Rnf111Q99ML9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf111Q99ML9 Cap2-205ENSMUST00000225824 1634 ntBASIC20.45■□□□□ 0.86
Rnf111Q99ML9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf111Q99ML9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf111Q99ML9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf111Q99ML9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf111Q99ML9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf111Q99ML9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf111Q99ML9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf111Q99ML9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Rnf111Q99ML9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf111Q99ML9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Rnf111Q99ML9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rnf111Q99ML9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rnf111Q99ML9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Rnf111Q99ML9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf111Q99ML9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Rnf111Q99ML9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf111Q99ML9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Rnf111Q99ML9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf111Q99ML9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf111Q99ML9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.42■□□□□ 0.86
Rnf111Q99ML9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf111Q99ML9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf111Q99ML9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf111Q99ML9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Rnf111Q99ML9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf111Q99ML9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf111Q99ML9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf111Q99ML9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf111Q99ML9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf111Q99ML9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf111Q99ML9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf111Q99ML9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Rnf111Q99ML9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf111Q99ML9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf111Q99ML9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.4■□□□□ 0.86
Rnf111Q99ML9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.4■□□□□ 0.86
Rnf111Q99ML9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf111Q99ML9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Rnf111Q99ML9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Rnf111Q99ML9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf111Q99ML9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf111Q99ML9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rnf111Q99ML9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rnf111Q99ML9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.39■□□□□ 0.86
Rnf111Q99ML9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rnf111Q99ML9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Rnf111Q99ML9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Rnf111Q99ML9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf111Q99ML9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Rnf111Q99ML9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.39■□□□□ 0.85
Rnf111Q99ML9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf111Q99ML9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf111Q99ML9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf111Q99ML9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.39■□□□□ 0.85
Rnf111Q99ML9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf111Q99ML9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf111Q99ML9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Rnf111Q99ML9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf111Q99ML9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf111Q99ML9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Rnf111Q99ML9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.38■□□□□ 0.85
Rnf111Q99ML9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf111Q99ML9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf111Q99ML9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf111Q99ML9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Rnf111Q99ML9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms