Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Nkx6-1Q99MA9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Nkx6-1Q99MA9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx6-1Q99MA9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx6-1Q99MA9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx6-1Q99MA9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.98■□□□□ 0.79
Nkx6-1Q99MA9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx6-1Q99MA9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx6-1Q99MA9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx6-1Q99MA9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx6-1Q99MA9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx6-1Q99MA9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx6-1Q99MA9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx6-1Q99MA9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx6-1Q99MA9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx6-1Q99MA9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx6-1Q99MA9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Nkx6-1Q99MA9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx6-1Q99MA9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx6-1Q99MA9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Nkx6-1Q99MA9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx6-1Q99MA9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx6-1Q99MA9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx6-1Q99MA9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx6-1Q99MA9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx6-1Q99MA9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx6-1Q99MA9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx6-1Q99MA9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.94■□□□□ 0.78
Nkx6-1Q99MA9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.93■□□□□ 0.78
Nkx6-1Q99MA9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
Nkx6-1Q99MA9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.93■□□□□ 0.78
Nkx6-1Q99MA9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
Nkx6-1Q99MA9 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.93■□□□□ 0.78
Nkx6-1Q99MA9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx6-1Q99MA9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx6-1Q99MA9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx6-1Q99MA9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
Nkx6-1Q99MA9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.92■□□□□ 0.78
Nkx6-1Q99MA9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx6-1Q99MA9 Gm43137-201ENSMUST00000198052 594 ntBASIC19.92■□□□□ 0.78
Nkx6-1Q99MA9 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.92■□□□□ 0.78
Nkx6-1Q99MA9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Nkx6-1Q99MA9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx6-1Q99MA9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx6-1Q99MA9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Nkx6-1Q99MA9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.91■□□□□ 0.78
Nkx6-1Q99MA9 Gm43017-201ENSMUST00000198296 752 ntBASIC19.91■□□□□ 0.78
Nkx6-1Q99MA9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx6-1Q99MA9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Nkx6-1Q99MA9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx6-1Q99MA9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx6-1Q99MA9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Nkx6-1Q99MA9 Mir7075-201ENSMUST00000184187 82 ntBASIC19.9■□□□□ 0.78
Nkx6-1Q99MA9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx6-1Q99MA9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx6-1Q99MA9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx6-1Q99MA9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx6-1Q99MA9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx6-1Q99MA9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.89■□□□□ 0.77
Nkx6-1Q99MA9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.89■□□□□ 0.77
Nkx6-1Q99MA9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx6-1Q99MA9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx6-1Q99MA9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx6-1Q99MA9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx6-1Q99MA9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Nkx6-1Q99MA9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx6-1Q99MA9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx6-1Q99MA9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx6-1Q99MA9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.88■□□□□ 0.77
Nkx6-1Q99MA9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.88■□□□□ 0.77
Nkx6-1Q99MA9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx6-1Q99MA9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx6-1Q99MA9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx6-1Q99MA9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx6-1Q99MA9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Nkx6-1Q99MA9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Nkx6-1Q99MA9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx6-1Q99MA9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Nkx6-1Q99MA9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx6-1Q99MA9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx6-1Q99MA9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx6-1Q99MA9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx6-1Q99MA9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.87■□□□□ 0.77
Nkx6-1Q99MA9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Nkx6-1Q99MA9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx6-1Q99MA9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx6-1Q99MA9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx6-1Q99MA9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx6-1Q99MA9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
Nkx6-1Q99MA9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx6-1Q99MA9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx6-1Q99MA9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Nkx6-1Q99MA9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.85■□□□□ 0.77
Nkx6-1Q99MA9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx6-1Q99MA9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx6-1Q99MA9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx6-1Q99MA9 Gm9870-201ENSMUST00000063874 645 ntBASIC19.85■□□□□ 0.77
Nkx6-1Q99MA9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx6-1Q99MA9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Nkx6-1Q99MA9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms