Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdha11Q91Y19 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Pcdha11Q91Y19 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdha11Q91Y19 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdha11Q91Y19 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.3■■□□□ 1.16
Pcdha11Q91Y19 Etf1-202ENSMUST00000180351 108 ntBASIC22.3■■□□□ 1.16
Pcdha11Q91Y19 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.3■■□□□ 1.16
Pcdha11Q91Y19 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.3■■□□□ 1.16
Pcdha11Q91Y19 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdha11Q91Y19 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdha11Q91Y19 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdha11Q91Y19 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdha11Q91Y19 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdha11Q91Y19 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdha11Q91Y19 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdha11Q91Y19 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Pcdha11Q91Y19 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.28■■□□□ 1.16
Pcdha11Q91Y19 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdha11Q91Y19 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC22.27■■□□□ 1.16
Pcdha11Q91Y19 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdha11Q91Y19 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.27■■□□□ 1.16
Pcdha11Q91Y19 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdha11Q91Y19 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdha11Q91Y19 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.15
Pcdha11Q91Y19 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdha11Q91Y19 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdha11Q91Y19 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdha11Q91Y19 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.26■■□□□ 1.15
Pcdha11Q91Y19 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdha11Q91Y19 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdha11Q91Y19 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.25■■□□□ 1.15
Pcdha11Q91Y19 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Pcdha11Q91Y19 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.25■■□□□ 1.15
Pcdha11Q91Y19 Gm10399-202ENSMUST00000202768 748 ntBASIC22.25■■□□□ 1.15
Pcdha11Q91Y19 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdha11Q91Y19 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdha11Q91Y19 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Pcdha11Q91Y19 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdha11Q91Y19 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdha11Q91Y19 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdha11Q91Y19 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdha11Q91Y19 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.24■■□□□ 1.15
Pcdha11Q91Y19 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdha11Q91Y19 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdha11Q91Y19 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdha11Q91Y19 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.23■■□□□ 1.15
Pcdha11Q91Y19 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.23■■□□□ 1.15
Pcdha11Q91Y19 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdha11Q91Y19 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.23■■□□□ 1.15
Pcdha11Q91Y19 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdha11Q91Y19 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.23■■□□□ 1.15
Pcdha11Q91Y19 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdha11Q91Y19 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdha11Q91Y19 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.22■■□□□ 1.15
Pcdha11Q91Y19 Gm40881-201ENSMUST00000223397 166 ntBASIC22.22■■□□□ 1.15
Pcdha11Q91Y19 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdha11Q91Y19 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Pcdha11Q91Y19 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
Pcdha11Q91Y19 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdha11Q91Y19 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.21■■□□□ 1.15
Pcdha11Q91Y19 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdha11Q91Y19 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdha11Q91Y19 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdha11Q91Y19 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Pcdha11Q91Y19 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Pcdha11Q91Y19 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdha11Q91Y19 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Pcdha11Q91Y19 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdha11Q91Y19 Gm7417-201ENSMUST00000192950 473 ntBASIC22.2■■□□□ 1.14
Pcdha11Q91Y19 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdha11Q91Y19 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdha11Q91Y19 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdha11Q91Y19 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdha11Q91Y19 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdha11Q91Y19 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.19■■□□□ 1.14
Pcdha11Q91Y19 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Pcdha11Q91Y19 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdha11Q91Y19 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdha11Q91Y19 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdha11Q91Y19 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.18■■□□□ 1.14
Pcdha11Q91Y19 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdha11Q91Y19 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdha11Q91Y19 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Pcdha11Q91Y19 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.18■■□□□ 1.14
Pcdha11Q91Y19 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Pcdha11Q91Y19 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdha11Q91Y19 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Pcdha11Q91Y19 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.16■■□□□ 1.14
Pcdha11Q91Y19 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Pcdha11Q91Y19 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.16■■□□□ 1.14
Pcdha11Q91Y19 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.16■■□□□ 1.14
Pcdha11Q91Y19 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdha11Q91Y19 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Pcdha11Q91Y19 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdha11Q91Y19 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdha11Q91Y19 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdha11Q91Y19 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Pcdha11Q91Y19 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdha11Q91Y19 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdha11Q91Y19 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms