Protein–RNA interactions for Protein: Q91Y14

Pcdha6, Pcdha6 protein, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha6Q91Y14 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.17■□□□□ 0.98
Pcdha6Q91Y14 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha6Q91Y14 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.17■□□□□ 0.98
Pcdha6Q91Y14 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha6Q91Y14 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha6Q91Y14 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha6Q91Y14 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha6Q91Y14 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha6Q91Y14 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Pcdha6Q91Y14 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdha6Q91Y14 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdha6Q91Y14 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.15■□□□□ 0.98
Pcdha6Q91Y14 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdha6Q91Y14 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdha6Q91Y14 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdha6Q91Y14 Gm10420-201ENSMUST00000121713 882 ntBASIC21.14■□□□□ 0.97
Pcdha6Q91Y14 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdha6Q91Y14 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdha6Q91Y14 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdha6Q91Y14 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.13■□□□□ 0.97
Pcdha6Q91Y14 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdha6Q91Y14 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha6Q91Y14 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha6Q91Y14 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha6Q91Y14 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Pcdha6Q91Y14 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha6Q91Y14 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha6Q91Y14 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha6Q91Y14 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha6Q91Y14 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha6Q91Y14 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha6Q91Y14 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Pcdha6Q91Y14 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Pcdha6Q91Y14 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha6Q91Y14 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha6Q91Y14 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha6Q91Y14 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha6Q91Y14 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.1■□□□□ 0.97
Pcdha6Q91Y14 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha6Q91Y14 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Pcdha6Q91Y14 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha6Q91Y14 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha6Q91Y14 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha6Q91Y14 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Pcdha6Q91Y14 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha6Q91Y14 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.09■□□□□ 0.97
Pcdha6Q91Y14 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha6Q91Y14 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Pcdha6Q91Y14 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha6Q91Y14 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha6Q91Y14 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha6Q91Y14 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha6Q91Y14 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha6Q91Y14 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdha6Q91Y14 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.07■□□□□ 0.96
Pcdha6Q91Y14 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.07■□□□□ 0.96
Pcdha6Q91Y14 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Pcdha6Q91Y14 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha6Q91Y14 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
Pcdha6Q91Y14 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha6Q91Y14 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.06■□□□□ 0.96
Pcdha6Q91Y14 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Pcdha6Q91Y14 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha6Q91Y14 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha6Q91Y14 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha6Q91Y14 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha6Q91Y14 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.06■□□□□ 0.96
Pcdha6Q91Y14 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha6Q91Y14 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha6Q91Y14 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha6Q91Y14 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha6Q91Y14 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha6Q91Y14 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha6Q91Y14 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha6Q91Y14 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.05■□□□□ 0.96
Pcdha6Q91Y14 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha6Q91Y14 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha6Q91Y14 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha6Q91Y14 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha6Q91Y14 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Pcdha6Q91Y14 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.04■□□□□ 0.96
Pcdha6Q91Y14 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha6Q91Y14 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Pcdha6Q91Y14 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha6Q91Y14 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.04■□□□□ 0.96
Pcdha6Q91Y14 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha6Q91Y14 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.03■□□□□ 0.96
Pcdha6Q91Y14 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha6Q91Y14 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha6Q91Y14 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Pcdha6Q91Y14 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha6Q91Y14 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha6Q91Y14 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha6Q91Y14 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha6Q91Y14 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.02■□□□□ 0.96
Pcdha6Q91Y14 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha6Q91Y14 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha6Q91Y14 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha6Q91Y14 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha6Q91Y14 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms