Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Pcdha8Q91Y12 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Pcdha8Q91Y12 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.55■□□□□ 0.88
Pcdha8Q91Y12 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha8Q91Y12 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Pcdha8Q91Y12 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha8Q91Y12 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.54■□□□□ 0.88
Pcdha8Q91Y12 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha8Q91Y12 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha8Q91Y12 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Pcdha8Q91Y12 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Pcdha8Q91Y12 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha8Q91Y12 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.53■□□□□ 0.88
Pcdha8Q91Y12 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha8Q91Y12 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.52■□□□□ 0.88
Pcdha8Q91Y12 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Pcdha8Q91Y12 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha8Q91Y12 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
Pcdha8Q91Y12 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdha8Q91Y12 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha8Q91Y12 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Pcdha8Q91Y12 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha8Q91Y12 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha8Q91Y12 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha8Q91Y12 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha8Q91Y12 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha8Q91Y12 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha8Q91Y12 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdha8Q91Y12 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha8Q91Y12 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha8Q91Y12 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha8Q91Y12 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha8Q91Y12 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha8Q91Y12 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.49■□□□□ 0.87
Pcdha8Q91Y12 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha8Q91Y12 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.49■□□□□ 0.87
Pcdha8Q91Y12 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha8Q91Y12 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha8Q91Y12 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha8Q91Y12 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha8Q91Y12 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha8Q91Y12 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.49■□□□□ 0.87
Pcdha8Q91Y12 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
Pcdha8Q91Y12 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha8Q91Y12 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha8Q91Y12 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha8Q91Y12 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha8Q91Y12 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha8Q91Y12 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.48■□□□□ 0.87
Pcdha8Q91Y12 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha8Q91Y12 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Pcdha8Q91Y12 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha8Q91Y12 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha8Q91Y12 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha8Q91Y12 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha8Q91Y12 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdha8Q91Y12 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha8Q91Y12 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha8Q91Y12 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha8Q91Y12 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha8Q91Y12 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdha8Q91Y12 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha8Q91Y12 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha8Q91Y12 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.46■□□□□ 0.87
Pcdha8Q91Y12 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha8Q91Y12 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pcdha8Q91Y12 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha8Q91Y12 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha8Q91Y12 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha8Q91Y12 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha8Q91Y12 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.46■□□□□ 0.87
Pcdha8Q91Y12 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha8Q91Y12 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
Pcdha8Q91Y12 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha8Q91Y12 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha8Q91Y12 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Pcdha8Q91Y12 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha8Q91Y12 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha8Q91Y12 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha8Q91Y12 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha8Q91Y12 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha8Q91Y12 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha8Q91Y12 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha8Q91Y12 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha8Q91Y12 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha8Q91Y12 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha8Q91Y12 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha8Q91Y12 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha8Q91Y12 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.44■□□□□ 0.86
Pcdha8Q91Y12 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha8Q91Y12 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha8Q91Y12 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha8Q91Y12 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha8Q91Y12 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha8Q91Y12 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.43■□□□□ 0.86
Pcdha8Q91Y12 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.43■□□□□ 0.86
Pcdha8Q91Y12 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pcdha8Q91Y12 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha8Q91Y12 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha8Q91Y12 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms