Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.87■■□□□ 1.09
Pcdhb6Q91XZ4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb6Q91XZ4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb6Q91XZ4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb6Q91XZ4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.86■■□□□ 1.09
Pcdhb6Q91XZ4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Pcdhb6Q91XZ4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.86■■□□□ 1.09
Pcdhb6Q91XZ4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Pcdhb6Q91XZ4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb6Q91XZ4 Gm45444-201ENSMUST00000211394 898 ntBASIC21.85■■□□□ 1.09
Pcdhb6Q91XZ4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.85■■□□□ 1.09
Pcdhb6Q91XZ4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb6Q91XZ4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb6Q91XZ4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb6Q91XZ4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
Pcdhb6Q91XZ4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb6Q91XZ4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb6Q91XZ4 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb6Q91XZ4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb6Q91XZ4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb6Q91XZ4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb6Q91XZ4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb6Q91XZ4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb6Q91XZ4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb6Q91XZ4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Pcdhb6Q91XZ4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb6Q91XZ4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb6Q91XZ4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.83■■□□□ 1.09
Pcdhb6Q91XZ4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb6Q91XZ4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Pcdhb6Q91XZ4 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb6Q91XZ4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb6Q91XZ4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
Pcdhb6Q91XZ4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb6Q91XZ4 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.82■■□□□ 1.08
Pcdhb6Q91XZ4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb6Q91XZ4 Gm5921-201ENSMUST00000075898 882 ntBASIC21.82■■□□□ 1.08
Pcdhb6Q91XZ4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb6Q91XZ4 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.81■■□□□ 1.08
Pcdhb6Q91XZ4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb6Q91XZ4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.81■■□□□ 1.08
Pcdhb6Q91XZ4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb6Q91XZ4 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb6Q91XZ4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.81■■□□□ 1.08
Pcdhb6Q91XZ4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb6Q91XZ4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb6Q91XZ4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.81■■□□□ 1.08
Pcdhb6Q91XZ4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb6Q91XZ4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Pcdhb6Q91XZ4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb6Q91XZ4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb6Q91XZ4 Gm13238-201ENSMUST00000117655 780 ntBASIC21.8■■□□□ 1.08
Pcdhb6Q91XZ4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.8■■□□□ 1.08
Pcdhb6Q91XZ4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Pcdhb6Q91XZ4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb6Q91XZ4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb6Q91XZ4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb6Q91XZ4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb6Q91XZ4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Pcdhb6Q91XZ4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb6Q91XZ4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb6Q91XZ4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb6Q91XZ4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb6Q91XZ4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb6Q91XZ4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb6Q91XZ4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb6Q91XZ4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb6Q91XZ4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Pcdhb6Q91XZ4 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.78■■□□□ 1.08
Pcdhb6Q91XZ4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.78■■□□□ 1.08
Pcdhb6Q91XZ4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
Pcdhb6Q91XZ4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb6Q91XZ4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.78■■□□□ 1.08
Pcdhb6Q91XZ4 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb6Q91XZ4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb6Q91XZ4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb6Q91XZ4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb6Q91XZ4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb6Q91XZ4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb6Q91XZ4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb6Q91XZ4 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.77■■□□□ 1.08
Pcdhb6Q91XZ4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.77■■□□□ 1.08
Pcdhb6Q91XZ4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb6Q91XZ4 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.76■■□□□ 1.07
Pcdhb6Q91XZ4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb6Q91XZ4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb6Q91XZ4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb6Q91XZ4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb6Q91XZ4 Gm43566-201ENSMUST00000196851 808 ntBASIC21.76■■□□□ 1.07
Pcdhb6Q91XZ4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Pcdhb6Q91XZ4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.76■■□□□ 1.07
Pcdhb6Q91XZ4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
Pcdhb6Q91XZ4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb6Q91XZ4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb6Q91XZ4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb6Q91XZ4 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb6Q91XZ4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb6Q91XZ4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Pcdhb6Q91XZ4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb6Q91XZ4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 202.8 ms