Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga11Q91XY8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga11Q91XY8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Pcdhga11Q91XY8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga11Q91XY8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.35■□□□□ 0.85
Pcdhga11Q91XY8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga11Q91XY8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga11Q91XY8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga11Q91XY8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga11Q91XY8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga11Q91XY8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga11Q91XY8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga11Q91XY8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhga11Q91XY8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhga11Q91XY8 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.33■□□□□ 0.85
Pcdhga11Q91XY8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.33■□□□□ 0.85
Pcdhga11Q91XY8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhga11Q91XY8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.33■□□□□ 0.84
Pcdhga11Q91XY8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.33■□□□□ 0.84
Pcdhga11Q91XY8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhga11Q91XY8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga11Q91XY8 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.32■□□□□ 0.84
Pcdhga11Q91XY8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Pcdhga11Q91XY8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga11Q91XY8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga11Q91XY8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga11Q91XY8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga11Q91XY8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga11Q91XY8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.31■□□□□ 0.84
Pcdhga11Q91XY8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga11Q91XY8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga11Q91XY8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga11Q91XY8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga11Q91XY8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga11Q91XY8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga11Q91XY8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga11Q91XY8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga11Q91XY8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.3■□□□□ 0.84
Pcdhga11Q91XY8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga11Q91XY8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga11Q91XY8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga11Q91XY8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga11Q91XY8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.3■□□□□ 0.84
Pcdhga11Q91XY8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga11Q91XY8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdhga11Q91XY8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga11Q91XY8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pcdhga11Q91XY8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga11Q91XY8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga11Q91XY8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhga11Q91XY8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdhga11Q91XY8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhga11Q91XY8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdhga11Q91XY8 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.28■□□□□ 0.84
Pcdhga11Q91XY8 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.28■□□□□ 0.84
Pcdhga11Q91XY8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga11Q91XY8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga11Q91XY8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga11Q91XY8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhga11Q91XY8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga11Q91XY8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga11Q91XY8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga11Q91XY8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhga11Q91XY8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga11Q91XY8 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.27■□□□□ 0.84
Pcdhga11Q91XY8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.27■□□□□ 0.84
Pcdhga11Q91XY8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga11Q91XY8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga11Q91XY8 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga11Q91XY8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhga11Q91XY8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhga11Q91XY8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhga11Q91XY8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga11Q91XY8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdhga11Q91XY8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pcdhga11Q91XY8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdhga11Q91XY8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Pcdhga11Q91XY8 Gm10420-201ENSMUST00000121713 882 ntBASIC20.25■□□□□ 0.83
Pcdhga11Q91XY8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Pcdhga11Q91XY8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga11Q91XY8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga11Q91XY8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Pcdhga11Q91XY8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga11Q91XY8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga11Q91XY8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhga11Q91XY8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhga11Q91XY8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcdhga11Q91XY8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.24■□□□□ 0.83
Pcdhga11Q91XY8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhga11Q91XY8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhga11Q91XY8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.23■□□□□ 0.83
Pcdhga11Q91XY8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhga11Q91XY8 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.23■□□□□ 0.83
Pcdhga11Q91XY8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhga11Q91XY8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhga11Q91XY8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhga11Q91XY8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhga11Q91XY8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhga11Q91XY8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhga11Q91XY8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms