Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.73■□□□□ 0.59
Pcdhga3Q91XY5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.73■□□□□ 0.59
Pcdhga3Q91XY5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga3Q91XY5 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga3Q91XY5 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga3Q91XY5 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga3Q91XY5 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga3Q91XY5 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga3Q91XY5 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga3Q91XY5 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga3Q91XY5 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdhga3Q91XY5 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.72■□□□□ 0.59
Pcdhga3Q91XY5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.72■□□□□ 0.59
Pcdhga3Q91XY5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Pcdhga3Q91XY5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhga3Q91XY5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga3Q91XY5 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhga3Q91XY5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga3Q91XY5 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga3Q91XY5 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Pcdhga3Q91XY5 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga3Q91XY5 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga3Q91XY5 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga3Q91XY5 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga3Q91XY5 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga3Q91XY5 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.71■□□□□ 0.59
Pcdhga3Q91XY5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga3Q91XY5 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga3Q91XY5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Pcdhga3Q91XY5 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga3Q91XY5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga3Q91XY5 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga3Q91XY5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga3Q91XY5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Pcdhga3Q91XY5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga3Q91XY5 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.7■□□□□ 0.58
Pcdhga3Q91XY5 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga3Q91XY5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga3Q91XY5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga3Q91XY5 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga3Q91XY5 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga3Q91XY5 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga3Q91XY5 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga3Q91XY5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga3Q91XY5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga3Q91XY5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga3Q91XY5 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga3Q91XY5 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga3Q91XY5 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga3Q91XY5 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga3Q91XY5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdhga3Q91XY5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga3Q91XY5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga3Q91XY5 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga3Q91XY5 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga3Q91XY5 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga3Q91XY5 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga3Q91XY5 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga3Q91XY5 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhga3Q91XY5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga3Q91XY5 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga3Q91XY5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.67■□□□□ 0.58
Pcdhga3Q91XY5 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pcdhga3Q91XY5 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdhga3Q91XY5 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhga3Q91XY5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcdhga3Q91XY5 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga3Q91XY5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga3Q91XY5 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga3Q91XY5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga3Q91XY5 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pcdhga3Q91XY5 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga3Q91XY5 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga3Q91XY5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga3Q91XY5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhga3Q91XY5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga3Q91XY5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga3Q91XY5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhga3Q91XY5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga3Q91XY5 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga3Q91XY5 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdhga3Q91XY5 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga3Q91XY5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga3Q91XY5 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga3Q91XY5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.65■□□□□ 0.58
Pcdhga3Q91XY5 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdhga3Q91XY5 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.65■□□□□ 0.58
Pcdhga3Q91XY5 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhga3Q91XY5 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga3Q91XY5 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhga3Q91XY5 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdhga3Q91XY5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga3Q91XY5 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga3Q91XY5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.63■□□□□ 0.57
Pcdhga3Q91XY5 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhga3Q91XY5 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga3Q91XY5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga3Q91XY5 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga3Q91XY5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga3Q91XY5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms