Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lims2Q91XD2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lims2Q91XD2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lims2Q91XD2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.98■■□□□ 1.11
Lims2Q91XD2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lims2Q91XD2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Lims2Q91XD2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lims2Q91XD2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.97■■□□□ 1.11
Lims2Q91XD2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.97■■□□□ 1.11
Lims2Q91XD2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lims2Q91XD2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Lims2Q91XD2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lims2Q91XD2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.96■■□□□ 1.11
Lims2Q91XD2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.96■■□□□ 1.11
Lims2Q91XD2 Gm40881-201ENSMUST00000223397 166 ntBASIC21.96■■□□□ 1.11
Lims2Q91XD2 Rps24-207ENSMUST00000224568 714 ntBASIC21.96■■□□□ 1.11
Lims2Q91XD2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lims2Q91XD2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Lims2Q91XD2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Lims2Q91XD2 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.96■■□□□ 1.11
Lims2Q91XD2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Lims2Q91XD2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lims2Q91XD2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
Lims2Q91XD2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Lims2Q91XD2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Lims2Q91XD2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Lims2Q91XD2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Lims2Q91XD2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lims2Q91XD2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.94■■□□□ 1.1
Lims2Q91XD2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Lims2Q91XD2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Lims2Q91XD2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.94■■□□□ 1.1
Lims2Q91XD2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.94■■□□□ 1.1
Lims2Q91XD2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lims2Q91XD2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.94■■□□□ 1.1
Lims2Q91XD2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lims2Q91XD2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
Lims2Q91XD2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Lims2Q91XD2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Lims2Q91XD2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lims2Q91XD2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lims2Q91XD2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.93■■□□□ 1.1
Lims2Q91XD2 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.93■■□□□ 1.1
Lims2Q91XD2 Gm14117-201ENSMUST00000122417 843 ntBASIC21.92■■□□□ 1.1
Lims2Q91XD2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lims2Q91XD2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lims2Q91XD2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lims2Q91XD2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lims2Q91XD2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.91■■□□□ 1.1
Lims2Q91XD2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.91■■□□□ 1.1
Lims2Q91XD2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lims2Q91XD2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lims2Q91XD2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lims2Q91XD2 Etf1-202ENSMUST00000180351 108 ntBASIC21.9■■□□□ 1.1
Lims2Q91XD2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.9■■□□□ 1.1
Lims2Q91XD2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Lims2Q91XD2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lims2Q91XD2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Lims2Q91XD2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Lims2Q91XD2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Lims2Q91XD2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.89■■□□□ 1.09
Lims2Q91XD2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.89■■□□□ 1.09
Lims2Q91XD2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Lims2Q91XD2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lims2Q91XD2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Lims2Q91XD2 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.87■■□□□ 1.09
Lims2Q91XD2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lims2Q91XD2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lims2Q91XD2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lims2Q91XD2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lims2Q91XD2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Lims2Q91XD2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Lims2Q91XD2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Lims2Q91XD2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.86■■□□□ 1.09
Lims2Q91XD2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.86■■□□□ 1.09
Lims2Q91XD2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lims2Q91XD2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
Lims2Q91XD2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lims2Q91XD2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Lims2Q91XD2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lims2Q91XD2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.85■■□□□ 1.09
Lims2Q91XD2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Lims2Q91XD2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lims2Q91XD2 Gm7417-201ENSMUST00000192950 473 ntBASIC21.84■■□□□ 1.09
Lims2Q91XD2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lims2Q91XD2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lims2Q91XD2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lims2Q91XD2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lims2Q91XD2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lims2Q91XD2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lims2Q91XD2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Lims2Q91XD2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Lims2Q91XD2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Lims2Q91XD2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Lims2Q91XD2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lims2Q91XD2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Lims2Q91XD2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Lims2Q91XD2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Lims2Q91XD2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lims2Q91XD2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms