Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Ddx39aQ8VDW0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ddx39aQ8VDW0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx39aQ8VDW0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx39aQ8VDW0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Ddx39aQ8VDW0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx39aQ8VDW0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx39aQ8VDW0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx39aQ8VDW0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx39aQ8VDW0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx39aQ8VDW0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx39aQ8VDW0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx39aQ8VDW0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx39aQ8VDW0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx39aQ8VDW0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx39aQ8VDW0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ddx39aQ8VDW0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ddx39aQ8VDW0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC23.58■■□□□ 1.37
Ddx39aQ8VDW0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ddx39aQ8VDW0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC23.57■■□□□ 1.36
Ddx39aQ8VDW0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx39aQ8VDW0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx39aQ8VDW0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx39aQ8VDW0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx39aQ8VDW0 Gm9847-201ENSMUST00000052528 599 ntBASIC23.57■■□□□ 1.36
Ddx39aQ8VDW0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx39aQ8VDW0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Ddx39aQ8VDW0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx39aQ8VDW0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Ddx39aQ8VDW0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC23.56■■□□□ 1.36
Ddx39aQ8VDW0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx39aQ8VDW0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx39aQ8VDW0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.55■■□□□ 1.36
Ddx39aQ8VDW0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC23.55■■□□□ 1.36
Ddx39aQ8VDW0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ddx39aQ8VDW0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ddx39aQ8VDW0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ddx39aQ8VDW0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ddx39aQ8VDW0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ddx39aQ8VDW0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx39aQ8VDW0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx39aQ8VDW0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Ddx39aQ8VDW0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx39aQ8VDW0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx39aQ8VDW0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC23.53■■□□□ 1.36
Ddx39aQ8VDW0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Ddx39aQ8VDW0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx39aQ8VDW0 Gm13241-201ENSMUST00000094493 780 ntBASIC23.53■■□□□ 1.36
Ddx39aQ8VDW0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx39aQ8VDW0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx39aQ8VDW0 Gm43034-201ENSMUST00000198678 1364 ntBASIC23.52■■□□□ 1.36
Ddx39aQ8VDW0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx39aQ8VDW0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC23.52■■□□□ 1.36
Ddx39aQ8VDW0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.52■■□□□ 1.36
Ddx39aQ8VDW0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx39aQ8VDW0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Ddx39aQ8VDW0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx39aQ8VDW0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx39aQ8VDW0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx39aQ8VDW0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx39aQ8VDW0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx39aQ8VDW0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx39aQ8VDW0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx39aQ8VDW0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx39aQ8VDW0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC23.51■■□□□ 1.35
Ddx39aQ8VDW0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx39aQ8VDW0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx39aQ8VDW0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx39aQ8VDW0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC23.5■■□□□ 1.35
Ddx39aQ8VDW0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx39aQ8VDW0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx39aQ8VDW0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx39aQ8VDW0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx39aQ8VDW0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Ddx39aQ8VDW0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ddx39aQ8VDW0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC23.49■■□□□ 1.35
Ddx39aQ8VDW0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC23.49■■□□□ 1.35
Ddx39aQ8VDW0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Ddx39aQ8VDW0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ddx39aQ8VDW0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ddx39aQ8VDW0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ddx39aQ8VDW0 Gm21956-201ENSMUST00000179946 522 ntBASIC23.48■■□□□ 1.35
Ddx39aQ8VDW0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ddx39aQ8VDW0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ddx39aQ8VDW0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC23.48■■□□□ 1.35
Ddx39aQ8VDW0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ddx39aQ8VDW0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx39aQ8VDW0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx39aQ8VDW0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC23.47■■□□□ 1.35
Ddx39aQ8VDW0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx39aQ8VDW0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC23.47■■□□□ 1.35
Ddx39aQ8VDW0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx39aQ8VDW0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx39aQ8VDW0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx39aQ8VDW0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC23.46■■□□□ 1.35
Ddx39aQ8VDW0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.46■■□□□ 1.35
Ddx39aQ8VDW0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Ddx39aQ8VDW0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ddx39aQ8VDW0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ddx39aQ8VDW0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 177.6 ms