Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chrna3Q8R4G9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.79■□□□□ 0.92
Chrna3Q8R4G9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chrna3Q8R4G9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna3Q8R4G9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Chrna3Q8R4G9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.78■□□□□ 0.92
Chrna3Q8R4G9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna3Q8R4G9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna3Q8R4G9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.78■□□□□ 0.92
Chrna3Q8R4G9 Etf1-202ENSMUST00000180351 108 ntBASIC20.78■□□□□ 0.92
Chrna3Q8R4G9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.78■□□□□ 0.92
Chrna3Q8R4G9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.78■□□□□ 0.92
Chrna3Q8R4G9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna3Q8R4G9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Chrna3Q8R4G9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna3Q8R4G9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna3Q8R4G9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna3Q8R4G9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna3Q8R4G9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna3Q8R4G9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.77■□□□□ 0.92
Chrna3Q8R4G9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Chrna3Q8R4G9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna3Q8R4G9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Chrna3Q8R4G9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Chrna3Q8R4G9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Chrna3Q8R4G9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chrna3Q8R4G9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chrna3Q8R4G9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Chrna3Q8R4G9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chrna3Q8R4G9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.76■□□□□ 0.91
Chrna3Q8R4G9 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.76■□□□□ 0.91
Chrna3Q8R4G9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chrna3Q8R4G9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Chrna3Q8R4G9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chrna3Q8R4G9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.75■□□□□ 0.91
Chrna3Q8R4G9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chrna3Q8R4G9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.75■□□□□ 0.91
Chrna3Q8R4G9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.75■□□□□ 0.91
Chrna3Q8R4G9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna3Q8R4G9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna3Q8R4G9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Chrna3Q8R4G9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna3Q8R4G9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna3Q8R4G9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna3Q8R4G9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna3Q8R4G9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna3Q8R4G9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna3Q8R4G9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna3Q8R4G9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna3Q8R4G9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna3Q8R4G9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna3Q8R4G9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Chrna3Q8R4G9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.73■□□□□ 0.91
Chrna3Q8R4G9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.73■□□□□ 0.91
Chrna3Q8R4G9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.73■□□□□ 0.91
Chrna3Q8R4G9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna3Q8R4G9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna3Q8R4G9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chrna3Q8R4G9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chrna3Q8R4G9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chrna3Q8R4G9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chrna3Q8R4G9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chrna3Q8R4G9 Gm10399-202ENSMUST00000202768 748 ntBASIC20.72■□□□□ 0.91
Chrna3Q8R4G9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chrna3Q8R4G9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chrna3Q8R4G9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chrna3Q8R4G9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chrna3Q8R4G9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chrna3Q8R4G9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.71■□□□□ 0.91
Chrna3Q8R4G9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Chrna3Q8R4G9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.71■□□□□ 0.91
Chrna3Q8R4G9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna3Q8R4G9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Chrna3Q8R4G9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chrna3Q8R4G9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.7■□□□□ 0.9
Chrna3Q8R4G9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chrna3Q8R4G9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.7■□□□□ 0.9
Chrna3Q8R4G9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chrna3Q8R4G9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Chrna3Q8R4G9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.7■□□□□ 0.9
Chrna3Q8R4G9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.7■□□□□ 0.9
Chrna3Q8R4G9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna3Q8R4G9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.69■□□□□ 0.9
Chrna3Q8R4G9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Chrna3Q8R4G9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.69■□□□□ 0.9
Chrna3Q8R4G9 Gm7417-201ENSMUST00000192950 473 ntBASIC20.69■□□□□ 0.9
Chrna3Q8R4G9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.69■□□□□ 0.9
Chrna3Q8R4G9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.68■□□□□ 0.9
Chrna3Q8R4G9 Gm40881-201ENSMUST00000223397 166 ntBASIC20.68■□□□□ 0.9
Chrna3Q8R4G9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Chrna3Q8R4G9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chrna3Q8R4G9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chrna3Q8R4G9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Chrna3Q8R4G9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chrna3Q8R4G9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chrna3Q8R4G9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chrna3Q8R4G9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chrna3Q8R4G9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chrna3Q8R4G9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.66■□□□□ 0.9
Chrna3Q8R4G9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms