Protein–RNA interactions for Protein: Q8R3P8

Rnf113a1, Ring finger protein 113A1, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf113a1Q8R3P8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf113a1Q8R3P8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.47■□□□□ 0.55
Rnf113a1Q8R3P8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf113a1Q8R3P8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.47■□□□□ 0.55
Rnf113a1Q8R3P8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Rnf113a1Q8R3P8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rnf113a1Q8R3P8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf113a1Q8R3P8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf113a1Q8R3P8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Rnf113a1Q8R3P8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf113a1Q8R3P8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf113a1Q8R3P8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rnf113a1Q8R3P8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Rnf113a1Q8R3P8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf113a1Q8R3P8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf113a1Q8R3P8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf113a1Q8R3P8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf113a1Q8R3P8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rnf113a1Q8R3P8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf113a1Q8R3P8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.45■□□□□ 0.54
Rnf113a1Q8R3P8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rnf113a1Q8R3P8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rnf113a1Q8R3P8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf113a1Q8R3P8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.45■□□□□ 0.54
Rnf113a1Q8R3P8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf113a1Q8R3P8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf113a1Q8R3P8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rnf113a1Q8R3P8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.44■□□□□ 0.54
Rnf113a1Q8R3P8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf113a1Q8R3P8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf113a1Q8R3P8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf113a1Q8R3P8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Rnf113a1Q8R3P8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Rnf113a1Q8R3P8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf113a1Q8R3P8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf113a1Q8R3P8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf113a1Q8R3P8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf113a1Q8R3P8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf113a1Q8R3P8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf113a1Q8R3P8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf113a1Q8R3P8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf113a1Q8R3P8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf113a1Q8R3P8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf113a1Q8R3P8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf113a1Q8R3P8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rnf113a1Q8R3P8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf113a1Q8R3P8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf113a1Q8R3P8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf113a1Q8R3P8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf113a1Q8R3P8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf113a1Q8R3P8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf113a1Q8R3P8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf113a1Q8R3P8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf113a1Q8R3P8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf113a1Q8R3P8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf113a1Q8R3P8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf113a1Q8R3P8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf113a1Q8R3P8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf113a1Q8R3P8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf113a1Q8R3P8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf113a1Q8R3P8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Rnf113a1Q8R3P8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf113a1Q8R3P8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf113a1Q8R3P8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf113a1Q8R3P8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Rnf113a1Q8R3P8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf113a1Q8R3P8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Rnf113a1Q8R3P8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.4■□□□□ 0.54
Rnf113a1Q8R3P8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.4■□□□□ 0.54
Rnf113a1Q8R3P8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf113a1Q8R3P8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Rnf113a1Q8R3P8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf113a1Q8R3P8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf113a1Q8R3P8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf113a1Q8R3P8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf113a1Q8R3P8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rnf113a1Q8R3P8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf113a1Q8R3P8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
Rnf113a1Q8R3P8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf113a1Q8R3P8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Rnf113a1Q8R3P8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf113a1Q8R3P8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf113a1Q8R3P8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf113a1Q8R3P8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf113a1Q8R3P8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf113a1Q8R3P8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Rnf113a1Q8R3P8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf113a1Q8R3P8 Rps24-207ENSMUST00000224568 714 ntBASIC18.38■□□□□ 0.53
Rnf113a1Q8R3P8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf113a1Q8R3P8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf113a1Q8R3P8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf113a1Q8R3P8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf113a1Q8R3P8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf113a1Q8R3P8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
Rnf113a1Q8R3P8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.37■□□□□ 0.53
Rnf113a1Q8R3P8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf113a1Q8R3P8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf113a1Q8R3P8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf113a1Q8R3P8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Rnf113a1Q8R3P8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms