Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Chmp7Q8R1T1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Chmp7Q8R1T1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Chmp7Q8R1T1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
Chmp7Q8R1T1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC27.34■■□□□ 1.97
Chmp7Q8R1T1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Chmp7Q8R1T1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Chmp7Q8R1T1 Gm27454-201ENSMUST00000185090 204 ntBASIC27.33■■□□□ 1.97
Chmp7Q8R1T1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Chmp7Q8R1T1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Chmp7Q8R1T1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Chmp7Q8R1T1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Chmp7Q8R1T1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC27.32■■□□□ 1.96
Chmp7Q8R1T1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC27.32■■□□□ 1.96
Chmp7Q8R1T1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
Chmp7Q8R1T1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Chmp7Q8R1T1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
Chmp7Q8R1T1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Chmp7Q8R1T1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Chmp7Q8R1T1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC27.31■■□□□ 1.96
Chmp7Q8R1T1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Chmp7Q8R1T1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
Chmp7Q8R1T1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Chmp7Q8R1T1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Chmp7Q8R1T1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Chmp7Q8R1T1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
Chmp7Q8R1T1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC27.3■■□□□ 1.96
Chmp7Q8R1T1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Chmp7Q8R1T1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Chmp7Q8R1T1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Chmp7Q8R1T1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC27.29■■□□□ 1.96
Chmp7Q8R1T1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC27.29■■□□□ 1.96
Chmp7Q8R1T1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Chmp7Q8R1T1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Chmp7Q8R1T1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Chmp7Q8R1T1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Chmp7Q8R1T1 AC116713.1-201ENSMUST00000215074 430 ntBASIC27.28■■□□□ 1.96
Chmp7Q8R1T1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
Chmp7Q8R1T1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC27.28■■□□□ 1.96
Chmp7Q8R1T1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
Chmp7Q8R1T1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
Chmp7Q8R1T1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
Chmp7Q8R1T1 Gm45417-201ENSMUST00000209533 758 ntBASIC27.26■■□□□ 1.95
Chmp7Q8R1T1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC27.26■■□□□ 1.95
Chmp7Q8R1T1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Chmp7Q8R1T1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC27.25■■□□□ 1.95
Chmp7Q8R1T1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC27.25■■□□□ 1.95
Chmp7Q8R1T1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Chmp7Q8R1T1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Chmp7Q8R1T1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
Chmp7Q8R1T1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Chmp7Q8R1T1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
Chmp7Q8R1T1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Chmp7Q8R1T1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Chmp7Q8R1T1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC27.23■■□□□ 1.95
Chmp7Q8R1T1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC27.23■■□□□ 1.95
Chmp7Q8R1T1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Chmp7Q8R1T1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Chmp7Q8R1T1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Chmp7Q8R1T1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
Chmp7Q8R1T1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Chmp7Q8R1T1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
Chmp7Q8R1T1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
Chmp7Q8R1T1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Chmp7Q8R1T1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC27.21■■□□□ 1.95
Chmp7Q8R1T1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Chmp7Q8R1T1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Chmp7Q8R1T1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Chmp7Q8R1T1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.95
Chmp7Q8R1T1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Chmp7Q8R1T1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Chmp7Q8R1T1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Chmp7Q8R1T1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.94
Chmp7Q8R1T1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Chmp7Q8R1T1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC27.19■■□□□ 1.94
Chmp7Q8R1T1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC27.19■■□□□ 1.94
Chmp7Q8R1T1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Chmp7Q8R1T1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Chmp7Q8R1T1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC27.19■■□□□ 1.94
Chmp7Q8R1T1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Chmp7Q8R1T1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Chmp7Q8R1T1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Chmp7Q8R1T1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC27.18■■□□□ 1.94
Chmp7Q8R1T1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Chmp7Q8R1T1 Serp2-204ENSMUST00000228055 705 ntBASIC27.17■■□□□ 1.94
Chmp7Q8R1T1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Chmp7Q8R1T1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Chmp7Q8R1T1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Chmp7Q8R1T1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Chmp7Q8R1T1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
Chmp7Q8R1T1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC27.15■■□□□ 1.94
Chmp7Q8R1T1 Gm9207-201ENSMUST00000198773 1115 ntBASIC27.15■■□□□ 1.94
Chmp7Q8R1T1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
Chmp7Q8R1T1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Chmp7Q8R1T1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Chmp7Q8R1T1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Chmp7Q8R1T1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Chmp7Q8R1T1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Chmp7Q8R1T1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC27.14■■□□□ 1.94
Chmp7Q8R1T1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms