Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Atf7Q8R0S1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Atf7Q8R0S1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Atf7Q8R0S1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Atf7Q8R0S1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Atf7Q8R0S1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC25.08■■□□□ 1.61
Atf7Q8R0S1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC25.08■■□□□ 1.61
Atf7Q8R0S1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
Atf7Q8R0S1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.6
Atf7Q8R0S1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC25.07■■□□□ 1.6
Atf7Q8R0S1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Atf7Q8R0S1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC25.07■■□□□ 1.6
Atf7Q8R0S1 Nsd1-203ENSMUST00000224156 1149 ntBASIC25.07■■□□□ 1.6
Atf7Q8R0S1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
Atf7Q8R0S1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Atf7Q8R0S1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC25.06■■□□□ 1.6
Atf7Q8R0S1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Atf7Q8R0S1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Atf7Q8R0S1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Atf7Q8R0S1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Atf7Q8R0S1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Atf7Q8R0S1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Atf7Q8R0S1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Atf7Q8R0S1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Atf7Q8R0S1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Atf7Q8R0S1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC25.05■■□□□ 1.6
Atf7Q8R0S1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Atf7Q8R0S1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC25.05■■□□□ 1.6
Atf7Q8R0S1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Atf7Q8R0S1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Atf7Q8R0S1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Atf7Q8R0S1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Atf7Q8R0S1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Atf7Q8R0S1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Atf7Q8R0S1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC25.04■■□□□ 1.6
Atf7Q8R0S1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Atf7Q8R0S1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
Atf7Q8R0S1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Atf7Q8R0S1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC25.03■■□□□ 1.6
Atf7Q8R0S1 Gm45444-201ENSMUST00000211394 898 ntBASIC25.03■■□□□ 1.6
Atf7Q8R0S1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Atf7Q8R0S1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Atf7Q8R0S1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC25.02■■□□□ 1.6
Atf7Q8R0S1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Atf7Q8R0S1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC25.02■■□□□ 1.6
Atf7Q8R0S1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC25.02■■□□□ 1.6
Atf7Q8R0S1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Atf7Q8R0S1 Gm28536-201ENSMUST00000190971 1317 ntBASIC25.02■■□□□ 1.6
Atf7Q8R0S1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Atf7Q8R0S1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
Atf7Q8R0S1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Atf7Q8R0S1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Atf7Q8R0S1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Atf7Q8R0S1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Atf7Q8R0S1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC25.01■■□□□ 1.59
Atf7Q8R0S1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Atf7Q8R0S1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Atf7Q8R0S1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Atf7Q8R0S1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Atf7Q8R0S1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Atf7Q8R0S1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
Atf7Q8R0S1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
Atf7Q8R0S1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Atf7Q8R0S1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC25■■□□□ 1.59
Atf7Q8R0S1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC25■■□□□ 1.59
Atf7Q8R0S1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Atf7Q8R0S1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Atf7Q8R0S1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Atf7Q8R0S1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Atf7Q8R0S1 AC116713.1-201ENSMUST00000215074 430 ntBASIC24.99■■□□□ 1.59
Atf7Q8R0S1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Atf7Q8R0S1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC24.99■■□□□ 1.59
Atf7Q8R0S1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Atf7Q8R0S1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Atf7Q8R0S1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Atf7Q8R0S1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Atf7Q8R0S1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Atf7Q8R0S1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Atf7Q8R0S1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Atf7Q8R0S1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Atf7Q8R0S1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Atf7Q8R0S1 Gm11847-201ENSMUST00000125165 1119 ntBASIC24.98■■□□□ 1.59
Atf7Q8R0S1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC24.98■■□□□ 1.59
Atf7Q8R0S1 Gm5921-201ENSMUST00000075898 882 ntBASIC24.98■■□□□ 1.59
Atf7Q8R0S1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC24.98■■□□□ 1.59
Atf7Q8R0S1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Atf7Q8R0S1 Gm43403-201ENSMUST00000198011 1786 ntBASIC24.98■■□□□ 1.59
Atf7Q8R0S1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Atf7Q8R0S1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
Atf7Q8R0S1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC24.97■■□□□ 1.59
Atf7Q8R0S1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24.97■■□□□ 1.59
Atf7Q8R0S1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Atf7Q8R0S1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
Atf7Q8R0S1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Atf7Q8R0S1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Atf7Q8R0S1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Atf7Q8R0S1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
Atf7Q8R0S1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Atf7Q8R0S1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Atf7Q8R0S1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms