Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22■■□□□ 1.11
Hmgcll1Q8JZS7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Hmgcll1Q8JZS7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.99■■□□□ 1.11
Hmgcll1Q8JZS7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Hmgcll1Q8JZS7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Hmgcll1Q8JZS7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.99■■□□□ 1.11
Hmgcll1Q8JZS7 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Hmgcll1Q8JZS7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Hmgcll1Q8JZS7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgcll1Q8JZS7 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgcll1Q8JZS7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgcll1Q8JZS7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgcll1Q8JZS7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Hmgcll1Q8JZS7 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.98■■□□□ 1.11
Hmgcll1Q8JZS7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgcll1Q8JZS7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
Hmgcll1Q8JZS7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgcll1Q8JZS7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Hmgcll1Q8JZS7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Hmgcll1Q8JZS7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Hmgcll1Q8JZS7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hmgcll1Q8JZS7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hmgcll1Q8JZS7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hmgcll1Q8JZS7 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hmgcll1Q8JZS7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hmgcll1Q8JZS7 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hmgcll1Q8JZS7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Hmgcll1Q8JZS7 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Hmgcll1Q8JZS7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Hmgcll1Q8JZS7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Hmgcll1Q8JZS7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
Hmgcll1Q8JZS7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgcll1Q8JZS7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgcll1Q8JZS7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.95■■□□□ 1.1
Hmgcll1Q8JZS7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.95■■□□□ 1.1
Hmgcll1Q8JZS7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgcll1Q8JZS7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgcll1Q8JZS7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgcll1Q8JZS7 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgcll1Q8JZS7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgcll1Q8JZS7 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgcll1Q8JZS7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Hmgcll1Q8JZS7 Gm22238-201ENSMUST00000175222 88 ntBASIC21.94■■□□□ 1.1
Hmgcll1Q8JZS7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgcll1Q8JZS7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Hmgcll1Q8JZS7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgcll1Q8JZS7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgcll1Q8JZS7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgcll1Q8JZS7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.93■■□□□ 1.1
Hmgcll1Q8JZS7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Hmgcll1Q8JZS7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Hmgcll1Q8JZS7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hmgcll1Q8JZS7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.93■■□□□ 1.1
Hmgcll1Q8JZS7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hmgcll1Q8JZS7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hmgcll1Q8JZS7 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Hmgcll1Q8JZS7 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hmgcll1Q8JZS7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hmgcll1Q8JZS7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hmgcll1Q8JZS7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Hmgcll1Q8JZS7 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hmgcll1Q8JZS7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Hmgcll1Q8JZS7 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hmgcll1Q8JZS7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Hmgcll1Q8JZS7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hmgcll1Q8JZS7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.91■■□□□ 1.1
Hmgcll1Q8JZS7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Hmgcll1Q8JZS7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hmgcll1Q8JZS7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hmgcll1Q8JZS7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hmgcll1Q8JZS7 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.9■■□□□ 1.1
Hmgcll1Q8JZS7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Hmgcll1Q8JZS7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hmgcll1Q8JZS7 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hmgcll1Q8JZS7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.9■■□□□ 1.1
Hmgcll1Q8JZS7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hmgcll1Q8JZS7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.9■■□□□ 1.1
Hmgcll1Q8JZS7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.9■■□□□ 1.1
Hmgcll1Q8JZS7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.9■■□□□ 1.1
Hmgcll1Q8JZS7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.9■■□□□ 1.1
Hmgcll1Q8JZS7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.9■■□□□ 1.1
Hmgcll1Q8JZS7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Hmgcll1Q8JZS7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Hmgcll1Q8JZS7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Hmgcll1Q8JZS7 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Hmgcll1Q8JZS7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Hmgcll1Q8JZS7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Hmgcll1Q8JZS7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hmgcll1Q8JZS7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Hmgcll1Q8JZS7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.88■■□□□ 1.09
Hmgcll1Q8JZS7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.88■■□□□ 1.09
Hmgcll1Q8JZS7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hmgcll1Q8JZS7 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hmgcll1Q8JZS7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Hmgcll1Q8JZS7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hmgcll1Q8JZS7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Hmgcll1Q8JZS7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
Hmgcll1Q8JZS7 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.87■■□□□ 1.09
Hmgcll1Q8JZS7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Hmgcll1Q8JZS7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms