Protein–RNA interactions for Protein: Q8CIG3

Kdm1b, Lysine-specific histone demethylase 1B, mousemouse

Predictions only

Length 826 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1bQ8CIG3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Kdm1bQ8CIG3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
Kdm1bQ8CIG3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Kdm1bQ8CIG3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Kdm1bQ8CIG3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Kdm1bQ8CIG3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Kdm1bQ8CIG3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.05■■□□□ 1.12
Kdm1bQ8CIG3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Kdm1bQ8CIG3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Kdm1bQ8CIG3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Kdm1bQ8CIG3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Kdm1bQ8CIG3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Kdm1bQ8CIG3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Kdm1bQ8CIG3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
Kdm1bQ8CIG3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC22.03■■□□□ 1.12
Kdm1bQ8CIG3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Kdm1bQ8CIG3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Kdm1bQ8CIG3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Kdm1bQ8CIG3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.03■■□□□ 1.12
Kdm1bQ8CIG3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Kdm1bQ8CIG3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Kdm1bQ8CIG3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Kdm1bQ8CIG3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Kdm1bQ8CIG3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Kdm1bQ8CIG3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Kdm1bQ8CIG3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Kdm1bQ8CIG3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Kdm1bQ8CIG3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Kdm1bQ8CIG3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Kdm1bQ8CIG3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Kdm1bQ8CIG3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.01■■□□□ 1.11
Kdm1bQ8CIG3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Kdm1bQ8CIG3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Kdm1bQ8CIG3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Kdm1bQ8CIG3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Kdm1bQ8CIG3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC22■■□□□ 1.11
Kdm1bQ8CIG3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22■■□□□ 1.11
Kdm1bQ8CIG3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Kdm1bQ8CIG3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Kdm1bQ8CIG3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Kdm1bQ8CIG3 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.99■■□□□ 1.11
Kdm1bQ8CIG3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Kdm1bQ8CIG3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Kdm1bQ8CIG3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Kdm1bQ8CIG3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Kdm1bQ8CIG3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Kdm1bQ8CIG3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Kdm1bQ8CIG3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Kdm1bQ8CIG3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Kdm1bQ8CIG3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Kdm1bQ8CIG3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Kdm1bQ8CIG3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Kdm1bQ8CIG3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.98■■□□□ 1.11
Kdm1bQ8CIG3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Kdm1bQ8CIG3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Kdm1bQ8CIG3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Kdm1bQ8CIG3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Kdm1bQ8CIG3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Kdm1bQ8CIG3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Kdm1bQ8CIG3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Kdm1bQ8CIG3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Kdm1bQ8CIG3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.97■■□□□ 1.11
Kdm1bQ8CIG3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.97■■□□□ 1.11
Kdm1bQ8CIG3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Kdm1bQ8CIG3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Kdm1bQ8CIG3 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.96■■□□□ 1.11
Kdm1bQ8CIG3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.96■■□□□ 1.11
Kdm1bQ8CIG3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Kdm1bQ8CIG3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Kdm1bQ8CIG3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
Kdm1bQ8CIG3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
Kdm1bQ8CIG3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Kdm1bQ8CIG3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Kdm1bQ8CIG3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Kdm1bQ8CIG3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Kdm1bQ8CIG3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Kdm1bQ8CIG3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Kdm1bQ8CIG3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Kdm1bQ8CIG3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Kdm1bQ8CIG3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Kdm1bQ8CIG3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Kdm1bQ8CIG3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.94■■□□□ 1.1
Kdm1bQ8CIG3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.94■■□□□ 1.1
Kdm1bQ8CIG3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Kdm1bQ8CIG3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Kdm1bQ8CIG3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Kdm1bQ8CIG3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Kdm1bQ8CIG3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Kdm1bQ8CIG3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Kdm1bQ8CIG3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Kdm1bQ8CIG3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Kdm1bQ8CIG3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Kdm1bQ8CIG3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.92■■□□□ 1.1
Kdm1bQ8CIG3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Kdm1bQ8CIG3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Kdm1bQ8CIG3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Kdm1bQ8CIG3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.92■■□□□ 1.1
Kdm1bQ8CIG3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Kdm1bQ8CIG3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Kdm1bQ8CIG3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.92■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms