Protein–RNA interactions for Protein: Q8CEZ1

Smco1, Single-pass membrane and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco1Q8CEZ1 Iqck-206ENSMUST00000208658 2891 ntBASIC19.27■□□□□ 0.68
Smco1Q8CEZ1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smco1Q8CEZ1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Smco1Q8CEZ1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smco1Q8CEZ1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Smco1Q8CEZ1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.27■□□□□ 0.68
Smco1Q8CEZ1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Smco1Q8CEZ1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smco1Q8CEZ1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Smco1Q8CEZ1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smco1Q8CEZ1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Smco1Q8CEZ1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Smco1Q8CEZ1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smco1Q8CEZ1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smco1Q8CEZ1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Smco1Q8CEZ1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Smco1Q8CEZ1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smco1Q8CEZ1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smco1Q8CEZ1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smco1Q8CEZ1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smco1Q8CEZ1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smco1Q8CEZ1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smco1Q8CEZ1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.25■□□□□ 0.67
Smco1Q8CEZ1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.25■□□□□ 0.67
Smco1Q8CEZ1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smco1Q8CEZ1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smco1Q8CEZ1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.25■□□□□ 0.67
Smco1Q8CEZ1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smco1Q8CEZ1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smco1Q8CEZ1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smco1Q8CEZ1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.25■□□□□ 0.67
Smco1Q8CEZ1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smco1Q8CEZ1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smco1Q8CEZ1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smco1Q8CEZ1 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.24■□□□□ 0.67
Smco1Q8CEZ1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smco1Q8CEZ1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.24■□□□□ 0.67
Smco1Q8CEZ1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smco1Q8CEZ1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.23■□□□□ 0.67
Smco1Q8CEZ1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smco1Q8CEZ1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.23■□□□□ 0.67
Smco1Q8CEZ1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smco1Q8CEZ1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Smco1Q8CEZ1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Smco1Q8CEZ1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smco1Q8CEZ1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smco1Q8CEZ1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smco1Q8CEZ1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smco1Q8CEZ1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smco1Q8CEZ1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smco1Q8CEZ1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Smco1Q8CEZ1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smco1Q8CEZ1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smco1Q8CEZ1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.22■□□□□ 0.67
Smco1Q8CEZ1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smco1Q8CEZ1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Smco1Q8CEZ1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Smco1Q8CEZ1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smco1Q8CEZ1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smco1Q8CEZ1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smco1Q8CEZ1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smco1Q8CEZ1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smco1Q8CEZ1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smco1Q8CEZ1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Smco1Q8CEZ1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smco1Q8CEZ1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.21■□□□□ 0.67
Smco1Q8CEZ1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smco1Q8CEZ1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Smco1Q8CEZ1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smco1Q8CEZ1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smco1Q8CEZ1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smco1Q8CEZ1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smco1Q8CEZ1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smco1Q8CEZ1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smco1Q8CEZ1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.19■□□□□ 0.66
Smco1Q8CEZ1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.19■□□□□ 0.66
Smco1Q8CEZ1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smco1Q8CEZ1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.19■□□□□ 0.66
Smco1Q8CEZ1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Smco1Q8CEZ1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smco1Q8CEZ1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smco1Q8CEZ1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smco1Q8CEZ1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smco1Q8CEZ1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smco1Q8CEZ1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Smco1Q8CEZ1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Smco1Q8CEZ1 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.18■□□□□ 0.66
Smco1Q8CEZ1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smco1Q8CEZ1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smco1Q8CEZ1 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.17■□□□□ 0.66
Smco1Q8CEZ1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smco1Q8CEZ1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smco1Q8CEZ1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Smco1Q8CEZ1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Smco1Q8CEZ1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.17■□□□□ 0.66
Smco1Q8CEZ1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Smco1Q8CEZ1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smco1Q8CEZ1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smco1Q8CEZ1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smco1Q8CEZ1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms