Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Rtp1Q8C8C1 Gm10620-201ENSMUST00000098379 1332 ntBASIC24.56■■□□□ 1.52
Rtp1Q8C8C1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rtp1Q8C8C1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Rtp1Q8C8C1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rtp1Q8C8C1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC24.55■■□□□ 1.52
Rtp1Q8C8C1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC24.55■■□□□ 1.52
Rtp1Q8C8C1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Rtp1Q8C8C1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rtp1Q8C8C1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rtp1Q8C8C1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
Rtp1Q8C8C1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC24.54■■□□□ 1.52
Rtp1Q8C8C1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Rtp1Q8C8C1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rtp1Q8C8C1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
Rtp1Q8C8C1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rtp1Q8C8C1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rtp1Q8C8C1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rtp1Q8C8C1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Rtp1Q8C8C1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Rtp1Q8C8C1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rtp1Q8C8C1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rtp1Q8C8C1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rtp1Q8C8C1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rtp1Q8C8C1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Rtp1Q8C8C1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rtp1Q8C8C1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC24.52■■□□□ 1.52
Rtp1Q8C8C1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
Rtp1Q8C8C1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC24.52■■□□□ 1.52
Rtp1Q8C8C1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Rtp1Q8C8C1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rtp1Q8C8C1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Rtp1Q8C8C1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rtp1Q8C8C1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rtp1Q8C8C1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rtp1Q8C8C1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rtp1Q8C8C1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Rtp1Q8C8C1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rtp1Q8C8C1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rtp1Q8C8C1 Gm43017-201ENSMUST00000198296 752 ntBASIC24.5■■□□□ 1.51
Rtp1Q8C8C1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rtp1Q8C8C1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rtp1Q8C8C1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rtp1Q8C8C1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC24.5■■□□□ 1.51
Rtp1Q8C8C1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rtp1Q8C8C1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Rtp1Q8C8C1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rtp1Q8C8C1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rtp1Q8C8C1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Rtp1Q8C8C1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Rtp1Q8C8C1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC24.48■■□□□ 1.51
Rtp1Q8C8C1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rtp1Q8C8C1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rtp1Q8C8C1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rtp1Q8C8C1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Rtp1Q8C8C1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rtp1Q8C8C1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rtp1Q8C8C1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC24.47■■□□□ 1.51
Rtp1Q8C8C1 Gm5874-201ENSMUST00000096101 508 ntBASIC24.47■■□□□ 1.51
Rtp1Q8C8C1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rtp1Q8C8C1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rtp1Q8C8C1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Rtp1Q8C8C1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rtp1Q8C8C1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Rtp1Q8C8C1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Rtp1Q8C8C1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Rtp1Q8C8C1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC24.45■■□□□ 1.5
Rtp1Q8C8C1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Rtp1Q8C8C1 Gm43137-201ENSMUST00000198052 594 ntBASIC24.45■■□□□ 1.5
Rtp1Q8C8C1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rtp1Q8C8C1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rtp1Q8C8C1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rtp1Q8C8C1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Rtp1Q8C8C1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Rtp1Q8C8C1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rtp1Q8C8C1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rtp1Q8C8C1 Mir7075-201ENSMUST00000184187 82 ntBASIC24.43■■□□□ 1.5
Rtp1Q8C8C1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Rtp1Q8C8C1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rtp1Q8C8C1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rtp1Q8C8C1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Rtp1Q8C8C1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rtp1Q8C8C1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC24.42■■□□□ 1.5
Rtp1Q8C8C1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rtp1Q8C8C1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rtp1Q8C8C1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Rtp1Q8C8C1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rtp1Q8C8C1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC24.4■■□□□ 1.5
Rtp1Q8C8C1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rtp1Q8C8C1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rtp1Q8C8C1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rtp1Q8C8C1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
Rtp1Q8C8C1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC24.39■■□□□ 1.49
Rtp1Q8C8C1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
Rtp1Q8C8C1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Rtp1Q8C8C1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Rtp1Q8C8C1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rtp1Q8C8C1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rtp1Q8C8C1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rtp1Q8C8C1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms