Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.71■□□□□ 0.59
Rft1Q8C3B8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rft1Q8C3B8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rft1Q8C3B8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.7■□□□□ 0.58
Rft1Q8C3B8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Rft1Q8C3B8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Rft1Q8C3B8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.7■□□□□ 0.58
Rft1Q8C3B8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.7■□□□□ 0.58
Rft1Q8C3B8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.7■□□□□ 0.58
Rft1Q8C3B8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rft1Q8C3B8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rft1Q8C3B8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rft1Q8C3B8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rft1Q8C3B8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.69■□□□□ 0.58
Rft1Q8C3B8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rft1Q8C3B8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.69■□□□□ 0.58
Rft1Q8C3B8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rft1Q8C3B8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rft1Q8C3B8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rft1Q8C3B8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rft1Q8C3B8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rft1Q8C3B8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rft1Q8C3B8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rft1Q8C3B8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.67■□□□□ 0.58
Rft1Q8C3B8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rft1Q8C3B8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.67■□□□□ 0.58
Rft1Q8C3B8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rft1Q8C3B8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rft1Q8C3B8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rft1Q8C3B8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rft1Q8C3B8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rft1Q8C3B8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rft1Q8C3B8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rft1Q8C3B8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Rft1Q8C3B8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rft1Q8C3B8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rft1Q8C3B8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rft1Q8C3B8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rft1Q8C3B8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rft1Q8C3B8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rft1Q8C3B8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rft1Q8C3B8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rft1Q8C3B8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rft1Q8C3B8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rft1Q8C3B8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.65■□□□□ 0.58
Rft1Q8C3B8 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.65■□□□□ 0.58
Rft1Q8C3B8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rft1Q8C3B8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rft1Q8C3B8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rft1Q8C3B8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rft1Q8C3B8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rft1Q8C3B8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rft1Q8C3B8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rft1Q8C3B8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rft1Q8C3B8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Rft1Q8C3B8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rft1Q8C3B8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rft1Q8C3B8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Rft1Q8C3B8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rft1Q8C3B8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rft1Q8C3B8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rft1Q8C3B8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rft1Q8C3B8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.63■□□□□ 0.57
Rft1Q8C3B8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.63■□□□□ 0.57
Rft1Q8C3B8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rft1Q8C3B8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rft1Q8C3B8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rft1Q8C3B8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rft1Q8C3B8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rft1Q8C3B8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rft1Q8C3B8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rft1Q8C3B8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rft1Q8C3B8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rft1Q8C3B8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.62■□□□□ 0.57
Rft1Q8C3B8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rft1Q8C3B8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rft1Q8C3B8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rft1Q8C3B8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rft1Q8C3B8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rft1Q8C3B8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.62■□□□□ 0.57
Rft1Q8C3B8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rft1Q8C3B8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rft1Q8C3B8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rft1Q8C3B8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rft1Q8C3B8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
Rft1Q8C3B8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rft1Q8C3B8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rft1Q8C3B8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rft1Q8C3B8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.61■□□□□ 0.57
Rft1Q8C3B8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.61■□□□□ 0.57
Rft1Q8C3B8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.61■□□□□ 0.57
Rft1Q8C3B8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rft1Q8C3B8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rft1Q8C3B8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rft1Q8C3B8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.6■□□□□ 0.57
Rft1Q8C3B8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rft1Q8C3B8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rft1Q8C3B8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rft1Q8C3B8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rft1Q8C3B8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms