Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Usp44Q8C2S0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Usp44Q8C2S0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
Usp44Q8C2S0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC25.06■■□□□ 1.6
Usp44Q8C2S0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
Usp44Q8C2S0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC25.06■■□□□ 1.6
Usp44Q8C2S0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Usp44Q8C2S0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Usp44Q8C2S0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Usp44Q8C2S0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Usp44Q8C2S0 Gm8093-201ENSMUST00000128935 1892 ntBASIC25.06■■□□□ 1.6
Usp44Q8C2S0 Gm16464-201ENSMUST00000117815 1095 ntBASIC25.05■■□□□ 1.6
Usp44Q8C2S0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC25.05■■□□□ 1.6
Usp44Q8C2S0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Usp44Q8C2S0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
Usp44Q8C2S0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Usp44Q8C2S0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
Usp44Q8C2S0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC25.04■■□□□ 1.6
Usp44Q8C2S0 Gm32051-202ENSMUST00000197905 2385 ntBASIC25.03■■□□□ 1.6
Usp44Q8C2S0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC25.03■■□□□ 1.6
Usp44Q8C2S0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
Usp44Q8C2S0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Usp44Q8C2S0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Usp44Q8C2S0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Usp44Q8C2S0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Usp44Q8C2S0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC25.02■■□□□ 1.6
Usp44Q8C2S0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Usp44Q8C2S0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
Usp44Q8C2S0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC25.02■■□□□ 1.6
Usp44Q8C2S0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Usp44Q8C2S0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Usp44Q8C2S0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Usp44Q8C2S0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Usp44Q8C2S0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Usp44Q8C2S0 AC116713.1-201ENSMUST00000215074 430 ntBASIC25.01■■□□□ 1.59
Usp44Q8C2S0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Usp44Q8C2S0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Usp44Q8C2S0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC25■■□□□ 1.59
Usp44Q8C2S0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Usp44Q8C2S0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC25■■□□□ 1.59
Usp44Q8C2S0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC25■■□□□ 1.59
Usp44Q8C2S0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Usp44Q8C2S0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Usp44Q8C2S0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Usp44Q8C2S0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Usp44Q8C2S0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Usp44Q8C2S0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Usp44Q8C2S0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Usp44Q8C2S0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
Usp44Q8C2S0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Usp44Q8C2S0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
Usp44Q8C2S0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC24.98■■□□□ 1.59
Usp44Q8C2S0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Usp44Q8C2S0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Usp44Q8C2S0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Usp44Q8C2S0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC24.97■■□□□ 1.59
Usp44Q8C2S0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Usp44Q8C2S0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Usp44Q8C2S0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Usp44Q8C2S0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Usp44Q8C2S0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Usp44Q8C2S0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Usp44Q8C2S0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Usp44Q8C2S0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC24.96■■□□□ 1.59
Usp44Q8C2S0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Usp44Q8C2S0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Usp44Q8C2S0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Usp44Q8C2S0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
Usp44Q8C2S0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Usp44Q8C2S0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Usp44Q8C2S0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
Usp44Q8C2S0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24.95■■□□□ 1.58
Usp44Q8C2S0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC24.95■■□□□ 1.58
Usp44Q8C2S0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
Usp44Q8C2S0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Usp44Q8C2S0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Usp44Q8C2S0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Usp44Q8C2S0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Usp44Q8C2S0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Usp44Q8C2S0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Usp44Q8C2S0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Usp44Q8C2S0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Usp44Q8C2S0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Usp44Q8C2S0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Usp44Q8C2S0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Usp44Q8C2S0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Usp44Q8C2S0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Usp44Q8C2S0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Usp44Q8C2S0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Usp44Q8C2S0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Usp44Q8C2S0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Usp44Q8C2S0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Usp44Q8C2S0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Usp44Q8C2S0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Usp44Q8C2S0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Usp44Q8C2S0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Usp44Q8C2S0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
Usp44Q8C2S0 Gm13042-201ENSMUST00000119244 1955 ntBASIC24.91■■□□□ 1.58
Usp44Q8C2S0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
Usp44Q8C2S0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 597.4 ms