Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trim47Q8C0E3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trim47Q8C0E3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC23.6■■□□□ 1.37
Trim47Q8C0E3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Trim47Q8C0E3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
Trim47Q8C0E3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trim47Q8C0E3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim47Q8C0E3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Trim47Q8C0E3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim47Q8C0E3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Trim47Q8C0E3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim47Q8C0E3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.59■■□□□ 1.37
Trim47Q8C0E3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim47Q8C0E3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Trim47Q8C0E3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Trim47Q8C0E3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.58■■□□□ 1.37
Trim47Q8C0E3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Trim47Q8C0E3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Trim47Q8C0E3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Trim47Q8C0E3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Trim47Q8C0E3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trim47Q8C0E3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trim47Q8C0E3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trim47Q8C0E3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Trim47Q8C0E3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trim47Q8C0E3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Trim47Q8C0E3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trim47Q8C0E3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Trim47Q8C0E3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trim47Q8C0E3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.55■■□□□ 1.36
Trim47Q8C0E3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC23.55■■□□□ 1.36
Trim47Q8C0E3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC23.55■■□□□ 1.36
Trim47Q8C0E3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trim47Q8C0E3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Trim47Q8C0E3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Trim47Q8C0E3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Trim47Q8C0E3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC23.54■■□□□ 1.36
Trim47Q8C0E3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC23.54■■□□□ 1.36
Trim47Q8C0E3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trim47Q8C0E3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC23.53■■□□□ 1.36
Trim47Q8C0E3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC23.53■■□□□ 1.36
Trim47Q8C0E3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
Trim47Q8C0E3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim47Q8C0E3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Trim47Q8C0E3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC23.53■■□□□ 1.36
Trim47Q8C0E3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim47Q8C0E3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
Trim47Q8C0E3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Trim47Q8C0E3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Trim47Q8C0E3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trim47Q8C0E3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trim47Q8C0E3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Trim47Q8C0E3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Trim47Q8C0E3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC23.51■■□□□ 1.35
Trim47Q8C0E3 Gm10399-202ENSMUST00000202768 748 ntBASIC23.51■■□□□ 1.35
Trim47Q8C0E3 Gm40881-201ENSMUST00000223397 166 ntBASIC23.51■■□□□ 1.35
Trim47Q8C0E3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim47Q8C0E3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim47Q8C0E3 Gm10620-201ENSMUST00000098379 1332 ntBASIC23.51■■□□□ 1.35
Trim47Q8C0E3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim47Q8C0E3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trim47Q8C0E3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.5■■□□□ 1.35
Trim47Q8C0E3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trim47Q8C0E3 Gm7417-201ENSMUST00000192950 473 ntBASIC23.49■■□□□ 1.35
Trim47Q8C0E3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Trim47Q8C0E3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim47Q8C0E3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim47Q8C0E3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim47Q8C0E3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC23.48■■□□□ 1.35
Trim47Q8C0E3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Trim47Q8C0E3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC23.48■■□□□ 1.35
Trim47Q8C0E3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Trim47Q8C0E3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Trim47Q8C0E3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trim47Q8C0E3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
Trim47Q8C0E3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC23.47■■□□□ 1.35
Trim47Q8C0E3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trim47Q8C0E3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC23.47■■□□□ 1.35
Trim47Q8C0E3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trim47Q8C0E3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Trim47Q8C0E3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Trim47Q8C0E3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Trim47Q8C0E3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Trim47Q8C0E3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Trim47Q8C0E3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
Trim47Q8C0E3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Trim47Q8C0E3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Trim47Q8C0E3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC23.45■■□□□ 1.35
Trim47Q8C0E3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Trim47Q8C0E3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trim47Q8C0E3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trim47Q8C0E3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trim47Q8C0E3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trim47Q8C0E3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trim47Q8C0E3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Trim47Q8C0E3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Trim47Q8C0E3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Trim47Q8C0E3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.44■■□□□ 1.34
Trim47Q8C0E3 Gm15039-201ENSMUST00000118914 875 ntBASIC23.44■■□□□ 1.34
Trim47Q8C0E3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms