Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf18Q8BM39 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Prpf18Q8BM39 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf18Q8BM39 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf18Q8BM39 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Prpf18Q8BM39 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf18Q8BM39 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf18Q8BM39 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf18Q8BM39 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.98■□□□□ 0.79
Prpf18Q8BM39 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf18Q8BM39 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf18Q8BM39 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf18Q8BM39 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf18Q8BM39 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Prpf18Q8BM39 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf18Q8BM39 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf18Q8BM39 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf18Q8BM39 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf18Q8BM39 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf18Q8BM39 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf18Q8BM39 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf18Q8BM39 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf18Q8BM39 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf18Q8BM39 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf18Q8BM39 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Prpf18Q8BM39 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf18Q8BM39 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf18Q8BM39 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf18Q8BM39 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.95■□□□□ 0.78
Prpf18Q8BM39 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf18Q8BM39 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf18Q8BM39 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf18Q8BM39 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf18Q8BM39 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf18Q8BM39 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Prpf18Q8BM39 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf18Q8BM39 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf18Q8BM39 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf18Q8BM39 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf18Q8BM39 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Prpf18Q8BM39 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.94■□□□□ 0.78
Prpf18Q8BM39 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf18Q8BM39 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.93■□□□□ 0.78
Prpf18Q8BM39 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf18Q8BM39 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Prpf18Q8BM39 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf18Q8BM39 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.93■□□□□ 0.78
Prpf18Q8BM39 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.93■□□□□ 0.78
Prpf18Q8BM39 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf18Q8BM39 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf18Q8BM39 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf18Q8BM39 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf18Q8BM39 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf18Q8BM39 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf18Q8BM39 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf18Q8BM39 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf18Q8BM39 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf18Q8BM39 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf18Q8BM39 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf18Q8BM39 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf18Q8BM39 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf18Q8BM39 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.91■□□□□ 0.78
Prpf18Q8BM39 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf18Q8BM39 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf18Q8BM39 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf18Q8BM39 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf18Q8BM39 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Prpf18Q8BM39 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Prpf18Q8BM39 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.9■□□□□ 0.78
Prpf18Q8BM39 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf18Q8BM39 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Prpf18Q8BM39 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.9■□□□□ 0.78
Prpf18Q8BM39 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.9■□□□□ 0.78
Prpf18Q8BM39 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.89■□□□□ 0.77
Prpf18Q8BM39 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Prpf18Q8BM39 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf18Q8BM39 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf18Q8BM39 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf18Q8BM39 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf18Q8BM39 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf18Q8BM39 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf18Q8BM39 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Prpf18Q8BM39 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf18Q8BM39 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Prpf18Q8BM39 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf18Q8BM39 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf18Q8BM39 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf18Q8BM39 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf18Q8BM39 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf18Q8BM39 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf18Q8BM39 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf18Q8BM39 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.87■□□□□ 0.77
Prpf18Q8BM39 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf18Q8BM39 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf18Q8BM39 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Prpf18Q8BM39 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
Prpf18Q8BM39 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf18Q8BM39 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf18Q8BM39 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.86■□□□□ 0.77
Prpf18Q8BM39 Scarna2-201ENSMUST00000157560 414 ntBASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 121.3 ms