Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
Col16a1Q8BLX7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Col16a1Q8BLX7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Col16a1Q8BLX7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC28.58■■■□□ 2.17
Col16a1Q8BLX7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC28.58■■■□□ 2.17
Col16a1Q8BLX7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Col16a1Q8BLX7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Col16a1Q8BLX7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Col16a1Q8BLX7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Col16a1Q8BLX7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Col16a1Q8BLX7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Col16a1Q8BLX7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Col16a1Q8BLX7 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Col16a1Q8BLX7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC28.56■■■□□ 2.16
Col16a1Q8BLX7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Col16a1Q8BLX7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Col16a1Q8BLX7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Col16a1Q8BLX7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC28.55■■■□□ 2.16
Col16a1Q8BLX7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
Col16a1Q8BLX7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Col16a1Q8BLX7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC28.54■■■□□ 2.16
Col16a1Q8BLX7 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC28.54■■■□□ 2.16
Col16a1Q8BLX7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
Col16a1Q8BLX7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Col16a1Q8BLX7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC28.53■■■□□ 2.16
Col16a1Q8BLX7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Col16a1Q8BLX7 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Col16a1Q8BLX7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
Col16a1Q8BLX7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Col16a1Q8BLX7 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Col16a1Q8BLX7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Col16a1Q8BLX7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Col16a1Q8BLX7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Col16a1Q8BLX7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC28.52■■■□□ 2.16
Col16a1Q8BLX7 Gm6139-201ENSMUST00000079261 882 ntBASIC28.52■■■□□ 2.16
Col16a1Q8BLX7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Col16a1Q8BLX7 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Col16a1Q8BLX7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
Col16a1Q8BLX7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC28.51■■■□□ 2.15
Col16a1Q8BLX7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Col16a1Q8BLX7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Col16a1Q8BLX7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Col16a1Q8BLX7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC28.5■■■□□ 2.15
Col16a1Q8BLX7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Col16a1Q8BLX7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Col16a1Q8BLX7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC28.5■■■□□ 2.15
Col16a1Q8BLX7 AC153890.1-201ENSMUST00000220021 2469 ntBASIC28.49■■■□□ 2.15
Col16a1Q8BLX7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Col16a1Q8BLX7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Col16a1Q8BLX7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Col16a1Q8BLX7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Col16a1Q8BLX7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
Col16a1Q8BLX7 Gm9207-201ENSMUST00000198773 1115 ntBASIC28.48■■■□□ 2.15
Col16a1Q8BLX7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Col16a1Q8BLX7 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Col16a1Q8BLX7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC28.46■■■□□ 2.15
Col16a1Q8BLX7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC28.46■■■□□ 2.15
Col16a1Q8BLX7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Col16a1Q8BLX7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC28.45■■■□□ 2.15
Col16a1Q8BLX7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Col16a1Q8BLX7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC28.45■■■□□ 2.14
Col16a1Q8BLX7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Col16a1Q8BLX7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC28.45■■■□□ 2.14
Col16a1Q8BLX7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Col16a1Q8BLX7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Col16a1Q8BLX7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
Col16a1Q8BLX7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Col16a1Q8BLX7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Col16a1Q8BLX7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Col16a1Q8BLX7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Col16a1Q8BLX7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC28.43■■■□□ 2.14
Col16a1Q8BLX7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Col16a1Q8BLX7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Col16a1Q8BLX7 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
Col16a1Q8BLX7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Col16a1Q8BLX7 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Col16a1Q8BLX7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Col16a1Q8BLX7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Col16a1Q8BLX7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Col16a1Q8BLX7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
Col16a1Q8BLX7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Col16a1Q8BLX7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Col16a1Q8BLX7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Col16a1Q8BLX7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Col16a1Q8BLX7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Col16a1Q8BLX7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Col16a1Q8BLX7 AC116713.1-201ENSMUST00000215074 430 ntBASIC28.4■■■□□ 2.14
Col16a1Q8BLX7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
Col16a1Q8BLX7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Col16a1Q8BLX7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
Col16a1Q8BLX7 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Col16a1Q8BLX7 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Col16a1Q8BLX7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Col16a1Q8BLX7 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.13
Col16a1Q8BLX7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Col16a1Q8BLX7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC28.39■■■□□ 2.13
Col16a1Q8BLX7 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Col16a1Q8BLX7 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Col16a1Q8BLX7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
Col16a1Q8BLX7 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms