Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp2bQ8BJF9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp2bQ8BJF9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp2bQ8BJF9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp2bQ8BJF9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp2bQ8BJF9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp2bQ8BJF9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp2bQ8BJF9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chmp2bQ8BJF9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chmp2bQ8BJF9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.58■■□□□ 1.05
Chmp2bQ8BJF9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Chmp2bQ8BJF9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Chmp2bQ8BJF9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.57■■□□□ 1.04
Chmp2bQ8BJF9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp2bQ8BJF9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp2bQ8BJF9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Chmp2bQ8BJF9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp2bQ8BJF9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Chmp2bQ8BJF9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp2bQ8BJF9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Chmp2bQ8BJF9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Chmp2bQ8BJF9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
Chmp2bQ8BJF9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chmp2bQ8BJF9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Chmp2bQ8BJF9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.56■■□□□ 1.04
Chmp2bQ8BJF9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chmp2bQ8BJF9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chmp2bQ8BJF9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp2bQ8BJF9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp2bQ8BJF9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp2bQ8BJF9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.55■■□□□ 1.04
Chmp2bQ8BJF9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp2bQ8BJF9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp2bQ8BJF9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp2bQ8BJF9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp2bQ8BJF9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp2bQ8BJF9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp2bQ8BJF9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp2bQ8BJF9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp2bQ8BJF9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Chmp2bQ8BJF9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Chmp2bQ8BJF9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chmp2bQ8BJF9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chmp2bQ8BJF9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chmp2bQ8BJF9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Chmp2bQ8BJF9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chmp2bQ8BJF9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chmp2bQ8BJF9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Chmp2bQ8BJF9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Chmp2bQ8BJF9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chmp2bQ8BJF9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chmp2bQ8BJF9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chmp2bQ8BJF9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Chmp2bQ8BJF9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chmp2bQ8BJF9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chmp2bQ8BJF9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chmp2bQ8BJF9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chmp2bQ8BJF9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chmp2bQ8BJF9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chmp2bQ8BJF9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Chmp2bQ8BJF9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Chmp2bQ8BJF9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chmp2bQ8BJF9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chmp2bQ8BJF9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chmp2bQ8BJF9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Chmp2bQ8BJF9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chmp2bQ8BJF9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chmp2bQ8BJF9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chmp2bQ8BJF9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chmp2bQ8BJF9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Chmp2bQ8BJF9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Chmp2bQ8BJF9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.5■■□□□ 1.03
Chmp2bQ8BJF9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chmp2bQ8BJF9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chmp2bQ8BJF9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chmp2bQ8BJF9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Chmp2bQ8BJF9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Chmp2bQ8BJF9 Gm27502-201ENSMUST00000183495 199 ntBASIC21.49■■□□□ 1.03
Chmp2bQ8BJF9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chmp2bQ8BJF9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chmp2bQ8BJF9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chmp2bQ8BJF9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Chmp2bQ8BJF9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chmp2bQ8BJF9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chmp2bQ8BJF9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chmp2bQ8BJF9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chmp2bQ8BJF9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chmp2bQ8BJF9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Chmp2bQ8BJF9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Chmp2bQ8BJF9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chmp2bQ8BJF9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chmp2bQ8BJF9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.47■■□□□ 1.03
Chmp2bQ8BJF9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chmp2bQ8BJF9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chmp2bQ8BJF9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Chmp2bQ8BJF9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Chmp2bQ8BJF9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chmp2bQ8BJF9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.46■■□□□ 1.03
Chmp2bQ8BJF9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Chmp2bQ8BJF9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms