Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf38Q8BI21 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf38Q8BI21 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rnf38Q8BI21 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Rnf38Q8BI21 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rnf38Q8BI21 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf38Q8BI21 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf38Q8BI21 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf38Q8BI21 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.37■□□□□ 0.85
Rnf38Q8BI21 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf38Q8BI21 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf38Q8BI21 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf38Q8BI21 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.37■□□□□ 0.85
Rnf38Q8BI21 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.37■□□□□ 0.85
Rnf38Q8BI21 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf38Q8BI21 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.37■□□□□ 0.85
Rnf38Q8BI21 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf38Q8BI21 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf38Q8BI21 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf38Q8BI21 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf38Q8BI21 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf38Q8BI21 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf38Q8BI21 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf38Q8BI21 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf38Q8BI21 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.35■□□□□ 0.85
Rnf38Q8BI21 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf38Q8BI21 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf38Q8BI21 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf38Q8BI21 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Rnf38Q8BI21 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf38Q8BI21 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf38Q8BI21 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf38Q8BI21 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf38Q8BI21 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf38Q8BI21 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf38Q8BI21 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf38Q8BI21 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf38Q8BI21 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.33■□□□□ 0.85
Rnf38Q8BI21 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf38Q8BI21 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf38Q8BI21 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf38Q8BI21 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf38Q8BI21 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf38Q8BI21 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf38Q8BI21 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.33■□□□□ 0.84
Rnf38Q8BI21 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf38Q8BI21 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf38Q8BI21 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf38Q8BI21 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf38Q8BI21 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf38Q8BI21 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Rnf38Q8BI21 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.31■□□□□ 0.84
Rnf38Q8BI21 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf38Q8BI21 Gm27502-201ENSMUST00000183495 199 ntBASIC20.31■□□□□ 0.84
Rnf38Q8BI21 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf38Q8BI21 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.31■□□□□ 0.84
Rnf38Q8BI21 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
Rnf38Q8BI21 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf38Q8BI21 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf38Q8BI21 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf38Q8BI21 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf38Q8BI21 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
Rnf38Q8BI21 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf38Q8BI21 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf38Q8BI21 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf38Q8BI21 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf38Q8BI21 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf38Q8BI21 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf38Q8BI21 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf38Q8BI21 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf38Q8BI21 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf38Q8BI21 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf38Q8BI21 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Rnf38Q8BI21 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.29■□□□□ 0.84
Rnf38Q8BI21 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf38Q8BI21 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Rnf38Q8BI21 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf38Q8BI21 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf38Q8BI21 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Rnf38Q8BI21 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf38Q8BI21 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf38Q8BI21 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf38Q8BI21 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf38Q8BI21 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf38Q8BI21 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.27■□□□□ 0.84
Rnf38Q8BI21 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf38Q8BI21 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf38Q8BI21 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf38Q8BI21 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf38Q8BI21 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf38Q8BI21 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf38Q8BI21 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf38Q8BI21 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Rnf38Q8BI21 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf38Q8BI21 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.26■□□□□ 0.83
Rnf38Q8BI21 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf38Q8BI21 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf38Q8BI21 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.26■□□□□ 0.83
Rnf38Q8BI21 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf38Q8BI21 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms