Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clrn3Q8BHH8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clrn3Q8BHH8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clrn3Q8BHH8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Clrn3Q8BHH8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Clrn3Q8BHH8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clrn3Q8BHH8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clrn3Q8BHH8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clrn3Q8BHH8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clrn3Q8BHH8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clrn3Q8BHH8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clrn3Q8BHH8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clrn3Q8BHH8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clrn3Q8BHH8 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.75■□□□□ 0.75
Clrn3Q8BHH8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Clrn3Q8BHH8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clrn3Q8BHH8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clrn3Q8BHH8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clrn3Q8BHH8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clrn3Q8BHH8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Clrn3Q8BHH8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clrn3Q8BHH8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clrn3Q8BHH8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.74■□□□□ 0.75
Clrn3Q8BHH8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Clrn3Q8BHH8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clrn3Q8BHH8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clrn3Q8BHH8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.74■□□□□ 0.75
Clrn3Q8BHH8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clrn3Q8BHH8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Clrn3Q8BHH8 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.73■□□□□ 0.75
Clrn3Q8BHH8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clrn3Q8BHH8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clrn3Q8BHH8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clrn3Q8BHH8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.72■□□□□ 0.75
Clrn3Q8BHH8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Clrn3Q8BHH8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clrn3Q8BHH8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clrn3Q8BHH8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.72■□□□□ 0.75
Clrn3Q8BHH8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.72■□□□□ 0.75
Clrn3Q8BHH8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clrn3Q8BHH8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clrn3Q8BHH8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clrn3Q8BHH8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clrn3Q8BHH8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.72■□□□□ 0.75
Clrn3Q8BHH8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clrn3Q8BHH8 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clrn3Q8BHH8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clrn3Q8BHH8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Clrn3Q8BHH8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.71■□□□□ 0.75
Clrn3Q8BHH8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clrn3Q8BHH8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clrn3Q8BHH8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clrn3Q8BHH8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clrn3Q8BHH8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clrn3Q8BHH8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clrn3Q8BHH8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Clrn3Q8BHH8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clrn3Q8BHH8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Clrn3Q8BHH8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clrn3Q8BHH8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clrn3Q8BHH8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clrn3Q8BHH8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn3Q8BHH8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn3Q8BHH8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn3Q8BHH8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn3Q8BHH8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn3Q8BHH8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.69■□□□□ 0.74
Clrn3Q8BHH8 Gm5921-201ENSMUST00000075898 882 ntBASIC19.69■□□□□ 0.74
Clrn3Q8BHH8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn3Q8BHH8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Clrn3Q8BHH8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn3Q8BHH8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn3Q8BHH8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Clrn3Q8BHH8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.68■□□□□ 0.74
Clrn3Q8BHH8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clrn3Q8BHH8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clrn3Q8BHH8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.68■□□□□ 0.74
Clrn3Q8BHH8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clrn3Q8BHH8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clrn3Q8BHH8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clrn3Q8BHH8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clrn3Q8BHH8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clrn3Q8BHH8 Gm45444-201ENSMUST00000211394 898 ntBASIC19.67■□□□□ 0.74
Clrn3Q8BHH8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.67■□□□□ 0.74
Clrn3Q8BHH8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.67■□□□□ 0.74
Clrn3Q8BHH8 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.67■□□□□ 0.74
Clrn3Q8BHH8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Clrn3Q8BHH8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Clrn3Q8BHH8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clrn3Q8BHH8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Clrn3Q8BHH8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Clrn3Q8BHH8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clrn3Q8BHH8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clrn3Q8BHH8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clrn3Q8BHH8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clrn3Q8BHH8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Clrn3Q8BHH8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clrn3Q8BHH8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clrn3Q8BHH8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.65■□□□□ 0.74
Clrn3Q8BHH8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms